Photoperiodism: 24-h rhythmic genes
24-h rhythmic genes both in short-day and long-day conditions
226 - 250 of 1107 entries
Probe set ID | P-value | FDR | Symbol | Name | Gene Category | phase (short day) | phase (long day) | max. correl. (short day) | max. correl. (long day) | amplitude (short day) | amplitude (long day) | rel. amplitude (short day) | rel. amplitude (long day) | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
226 | 1426955_at | 7.02317e-05 | 0.0105233 | Col18a1 | collagen, type XVIII, alpha 1 | CA EM SP | 5.35597 | 0.842243 | 0.866161 | 209.467 | 100.805 | 0.383233 | 0.282995 | 0.0032272 |
227 | 1427884_at | 0.000635462 | 0.036456 | Col3a1 | collagen, type III, alpha 1 | CA EM SP | 5.41982 | 0.847996 | 0.753081 | 46.0457 | 31.392 | 0.782818 | 0.576628 | 0.0027904 |
228 | 1427883_a_at | 0.000661686 | 0.0372104 | Col3a1 | collagen, type III, alpha 1 | CA EM SP | 4.85759 | 0.738489 | 0.854693 | 1197.33 | 434.507 | 0.968715 | 0.354469 | 0.0267655 |
229 | 1419703_at | 0.000776168 | 0.0395995 | Col5a3 | collagen, type V, alpha 3 | CA EM SP | 7.09164 | 0.837258 | 0.756466 | 49.5896 | 52.2986 | 0.290543 | 0.338931 | 0.00367841 |
230 | 1423250_a_at | 6.4411e-05 | 0.010167 | Tgfb2 | transforming growth factor, beta 2 | CA EM Ng NH/NT | 10.1513 | 0.866708 | 0.845634 | 278.529 | 348.927 | 0.640918 | 0.664757 | 0.00163522 |
231 | 1450922_a_at | 0.00027884 | 0.0233754 | Tgfb2 | transforming growth factor, beta 2 | CA EM Ng NH/NT | 11.2269 | 0.843227 | 0.807098 | 129.5 | 197.756 | 0.519859 | 0.559791 | 0.00316068 |
232 | 1448383_at | 1.51566e-08 | 0.000145124 | Mmp14 | matrix metallopeptidase 14 (membrane-inserted) | CA EM Ng | 4.79969 | 0.964712 | 0.931257 | 482.415 | 448.815 | 0.640055 | 0.619028 | 6.65174e-06 |
233 | 1416572_at | 6.05244e-08 | 0.000248156 | Mmp14 | matrix metallopeptidase 14 (membrane-inserted) | CA EM Ng | 5.3027 | 0.955202 | 0.921825 | 70.861 | 46.856 | 0.504234 | 0.326825 | 1.66293e-05 |
234 | 1451342_at | 4.74105e-10 | 2.13826e-05 | Spon1 | spondin 1, (f-spondin) extracellular matrix protein | CA EM | 7.85535 | 0.954424 | 0.981275 | 2395.83 | 1723.7 | 0.538424 | 0.37279 | 1.66293e-05 |
235 | 1424415_s_at | 2.81525e-09 | 6.34853e-05 | Spon1 | spondin 1, (f-spondin) extracellular matrix protein | CA EM | 9.31817 | 0.979519 | 0.930553 | 419.998 | 400.924 | 0.552993 | 0.537359 | 1.10862e-06 |
236 | 1442613_at | 8.33592e-06 | 0.00344916 | Spon1 | spondin 1, (f-spondin) extracellular matrix protein | CA EM | 8.96831 | 0.905292 | 0.871061 | 79.1745 | 57.9218 | 0.525403 | 0.380187 | 0.000385801 |
237 | 1448417_at | 4.79028e-05 | 0.00857298 | Ninj1 | ninjurin 1 | CA | 2.0676 | 0.901844 | 0.805283 | 171.657 | 56.4459 | 0.547264 | 0.290004 | 0.000446775 |
238 | 1437782_at | 0.00014777 | 0.0157848 | Cntnap2 | contactin associated protein-like 2 | CA | 11.0396 | 0.864806 | 0.810812 | 253.462 | 182.516 | 0.469967 | 0.347374 | 0.00171837 |
239 | 1424701_at | 0.000216257 | 0.0198644 | Pcdh20 | protocadherin 20 | CA | 15.5507 | 0.845585 | 0.817067 | 392.312 | 398.538 | 0.399171 | 0.382889 | 0.00297887 |
240 | 1417240_at | 0.000331039 | 0.0259656 | Zyx | zyxin | CA | 1.76307 | 0.746828 | 0.874827 | 146.787 | 36.9678 | 0.421985 | 0.147867 | 0.0234917 |
241 | 1421729_a_at | 0.000501207 | 0.0324361 | Fert2 | fer (fms/fps related) protein kinase, testis specific 2 | CA | 0.226539 | 0.798819 | 0.824748 | 53.455 | 59.7532 | 0.226974 | 0.238143 | 0.0090641 |
242 | 1416716_at | 0.000704562 | 0.0378291 | Efs | embryonal Fyn-associated substrate | CA | 2.93374 | 0.840094 | 0.758343 | 132.374 | 92.0815 | 0.296434 | 0.275904 | 0.00340902 |
243 | 1441281_s_at | 0.000716137 | 0.0381779 | Ninj1 | ninjurin 1 | CA | 3.55264 | 0.825462 | 0.778479 | 272.312 | 100.292 | 0.533491 | 0.334518 | 0.00495444 |
244 | 1422445_at | 0.00074513 | 0.0390437 | Itga6 | integrin alpha 6 | CA | 10.1947 | 0.749304 | 0.843722 | 143.403 | 155.765 | 0.24119 | 0.236907 | 0.0225405 |
245 | 1438928_x_at | 0.000761115 | 0.0394564 | Ninj1 | ninjurin 1 | CA | 3.48167 | 0.818126 | 0.784256 | 1016.41 | 320.607 | 0.504326 | 0.271103 | 0.00592892 |
246 | 1426546_at | 0.000823902 | 0.0409689 | Tesk2 | testis-specific kinase 2 | CA | 8.56016 | 0.752657 | 0.837112 | 72.9151 | 52.8287 | 0.343519 | 0.203725 | 0.0213609 |
247 | 1438114_x_at | 0.000863334 | 0.0419582 | Efs | embryonal Fyn-associated substrate | CA | 8.27751 | 0.934357 | 0.121977 | 86.7841 | 59.2388 | 0.258742 | 0.23978 | 8.86898e-05 |
248 | 1436003_at | 0.00121801 | 0.0497136 | Vcam1 | vascular cell adhesion molecule 1 | CA | 15.3216 | 0.512027 | 0.899873 | 2.97261 | 2.65017 | 0.177035 | 0.152471 | 0.255133 |
249 | 1455678_at | 0.000276293 | 0.023205 | Sema4b | sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B | AG | 8.45413 | 0.912893 | 0.64927 | 365.063 | 111.201 | 0.402853 | 0.192351 | 0.000287133 |
250 | 1442590_at | 1.60888e-08 | 0.000145124 | Tnfrsf23 | tumor necrosis factor receptor superfamily, member 23 | 3.86803 | 0.964137 | 0.929273 | 69.8937 | 29.2064 | 0.444601 | 0.232107 | 6.65174e-06 |
TF=Transcription Factor;
Ch=Channel;
GPCR=GPCR;
CA=Cell Adhesion;
EM=Extracellular Matrix;
SP=Structural Protein;
Ng=Neurogenesis;
Hox=Homeobox;
NR=Nuclear Receptor;
NH/NT=NH/NT;
AG=Axon Guidance;
SLC=SLC Transporter;
Fox=Forkhead