Photoperiodism

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Photoperiodism: 24-h rhythmic genes

24-h rhythmic genes both in short-day and long-day conditions (Help)

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Probe set ID P-value [asc] FDR Symbol Name Gene Category phase (short day) phase (long day) max. correl. (short day) max. correl. (long day) amplitude (short day) amplitude (long day) rel. amplitude (short day) rel. amplitude (long day)
1 1451342_at [new page][B* page] 4.74105e-10 2.13826e-05 Spon1 spondin 1, (f-spondin) extracellular matrix protein CA EM 7.85535 0.954424 0.981275 2395.83 1723.7 0.538424 0.37279 1.66293e-05
2 1424415_s_at [new page][B* page] 2.81525e-09 6.34853e-05 Spon1 spondin 1, (f-spondin) extracellular matrix protein CA EM 9.31817 0.979519 0.930553 419.998 400.924 0.552993 0.537359 1.10862e-06
3 1417602_at [new page][B* page] 1.1134e-08 0.000145124 Per2 period homolog 2 (Drosophila) TF 17.1449 0.971705 0.929008 323.916 431.892 1.11776 1.15459 4.43449e-06
4 1448383_at [new page][B* page] 1.51566e-08 0.000145124 Mmp14 matrix metallopeptidase 14 (membrane-inserted) CA EM Ng 4.79969 0.964712 0.931257 482.415 448.815 0.640055 0.619028 6.65174e-06
5 1442590_at [new page][B* page] 1.60888e-08 0.000145124 Tnfrsf23 tumor necrosis factor receptor superfamily, member 23 3.86803 0.964137 0.929273 69.8937 29.2064 0.444601 0.232107 6.65174e-06
6 1420481_at [new page][B* page] 2.61932e-08 0.00019689 Cnnm3 cyclin M3 4.11399 0.94913 0.941579 185.16 135.86 0.461107 0.394211 2.43897e-05
7 1425099_a_at [new page][B* page] 4.65463e-08 0.000245668 Arntl aryl hydrocarbon receptor nuclear translocator-like TF 3.27354 0.983678 0.859557 514.646 549.081 0.94154 1.10836 1.10862e-06
8 1450779_at [new page][B* page] 5.02851e-08 0.000245668 Fabp7 fatty acid binding protein 7, brain Ng 7.3529 0.922582 0.956773 815.454 962.863 0.694502 0.894705 0.000167402
9 1447676_x_at [new page][B* page] 5.31099e-08 0.000245668 S100a16 S100 calcium binding protein A16 6.4115 0.888963 0.973571 1816.23 991.25 0.494032 0.314649 0.000768276
10 1425560_a_at [new page][B* page] 5.44707e-08 0.000245668 S100a16 S100 calcium binding protein A16 5.86226 0.936735 0.946323 855.01 546.144 0.399967 0.308214 6.7626e-05
11 1416572_at [new page][B* page] 6.05244e-08 0.000248156 Mmp14 matrix metallopeptidase 14 (membrane-inserted) CA EM Ng 5.3027 0.955202 0.921825 70.861 46.856 0.504234 0.326825 1.66293e-05
12 1416053_at [new page][B* page] 9.60954e-08 0.000322535 Lrrn1 leucine rich repeat protein 1, neuronal 7.15797 0.956565 0.911133 474.121 430.111 0.330779 0.271247 1.55207e-05
13 1416776_at [new page][B* page] 9.96245e-08 0.000322535 Crym crystallin, mu TF 5.70157 0.951186 0.91725 171.649 139.591 0.504234 0.487969 2.10638e-05
14 1433398_at [new page][B* page] 1.04788e-07 0.000322535 Fgd3 FYVE, RhoGEF and PH domain containing 3 3.85734 0.961562 0.895681 220.316 161.464 1.24401 0.951477 8.86898e-06
15 1455385_at [new page][B* page] 1.07271e-07 0.000322535 Exoc6 exocyst complex component 6 8.64694 0.955631 0.908446 84.292 69.8724 0.472778 0.446345 1.55207e-05
16 1416101_a_at [new page][B* page] 1.49392e-07 0.000380413 Hist1h1c histone cluster 1, H1c 6.20977 0.926219 0.940348 2412.84 2540.74 0.406403 0.335658 0.000134143
17 1424542_at [new page][B* page] 1.52676e-07 0.000380413 S100a4 S100 calcium binding protein A4 8.43146 0.949109 0.910082 41.684 34.7298 0.624906 0.626271 2.43897e-05
18 1434843_at [new page][B* page] 1.70339e-07 0.000380413 Fam179b family with sequence similarity 179, member B 16.1861 0.805572 0.9855 819.271 753.437 0.314536 0.215145 0.0078557
19 1445532_at [new page][B* page] 1.74123e-07 0.000380413 Myo16 myosin XVI 6.08944 0.970958 0.85937 285.876 152.512 0.603264 0.435407 4.43449e-06
20 1426992_at [new page][B* page] 1.74533e-07 0.000380413 Xpr1 xenotropic and polytropic retrovirus receptor 1 7.40635 0.975168 0.833721 1864.3 803.461 0.314684 0.161675 2.21725e-06
21 1435141_at [new page][B* page] 1.77128e-07 0.000380413 Sft2d2 SFT2 domain containing 2 19.4959 0.923138 0.940026 1177.05 948.415 0.340089 0.279997 0.000157424
22 1435658_at [new page][B* page] 2.00712e-07 0.000411468 Slc27a1 solute carrier family 27 (fatty acid transporter), member 1 SLC 6.95036 0.914881 0.945521 296.181 186.165 0.267997 0.198302 0.000259418
23 1416121_at [new page][B* page] 2.13434e-07 0.000418525 Lox lysyl oxidase EM 5.19652 0.899957 0.949313 114.355 76.4427 0.660732 0.429253 0.000474491
24 1428643_at [new page][B* page] 2.68758e-07 0.000485571 Mgat5 mannoside acetylglucosaminyltransferase 5 8.0217 0.949116 0.896152 747.184 620.379 0.322385 0.286609 2.43897e-05
25 1454942_at [new page][B* page] 2.69157e-07 0.000485571 Fam129a family with sequence similarity 129, member A 7.20982 0.963863 0.862881 265.032 110.903 0.690883 0.321987 7.76036e-06
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TF=Transcription Factor; Ch=Channel; GPCR=GPCR; CA=Cell Adhesion; EM=Extracellular Matrix; SP=Structural Protein; Ng=Neurogenesis; Hox=Homeobox; NR=Nuclear Receptor; NH/NT=NH/NT; AG=Axon Guidance; SLC=SLC Transporter; Fox=Forkhead
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