Photoperiodism: 24-h rhythmic genes
24-h rhythmic genes both in short-day and long-day conditions
1 - 25 of 1107 entries
Probe set ID | P-value | FDR | Symbol | Name | Gene Category | phase (short day) | phase (long day) | max. correl. (short day) | max. correl. (long day) | amplitude (short day) | amplitude (long day) | rel. amplitude (short day) | rel. amplitude (long day) | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | 1424606_at | 0.000802176 | 0.0402883 | Cplx3 | complexin 3 | 8.95043 | 0.847839 | 0.737008 | 119.45 | 21.2268 | 1.93548 | 0.307396 | 0.00279927 | |
2 | 1418174_at | 0.000126199 | 0.0145941 | Dbp | D site albumin promoter binding protein | TF | 13.2509 | 0.866128 | 0.817091 | 1742.18 | 1142.51 | 1.79709 | 1.29291 | 0.00165739 |
3 | 1450333_a_at | 0.000621385 | 0.0363019 | Gata2 | GATA binding protein 2 | TF Ng | 7.01527 | 0.669308 | 0.885739 | 1407.25 | 373.8 | 1.6175 | 0.349979 | 0.0662779 |
4 | 1438211_s_at | 3.2551e-06 | 0.00222221 | Dbp | D site albumin promoter binding protein | TF | 13.054 | 0.946435 | 0.820706 | 5755.18 | 5120.13 | 1.4694 | 1.33637 | 3.54759e-05 |
5 | 1438953_at | 1.35166e-05 | 0.00482926 | Figf | c-fos induced growth factor | 8.93867 | 0.976421 | 0.426312 | 653.245 | 288.666 | 1.45564 | 0.529256 | 2.21725e-06 | |
6 | 1427127_x_at | 0.000579613 | 0.0348861 | Hspa1b | heat shock protein 1B | 20.2941 | 0.765245 | 0.844262 | 619.843 | 511.649 | 1.43881 | 1.7134 | 0.0173244 | |
7 | 1427126_at | 0.000591183 | 0.035254 | Hspa1b | heat shock protein 1B | 20.4418 | 0.789166 | 0.825541 | 418.467 | 348.406 | 1.42797 | 1.75437 | 0.0110463 | |
8 | 1438954_x_at | 2.25762e-05 | 0.00595422 | Figf | c-fos induced growth factor | 8.20625 | 0.967374 | 0.455033 | 672.61 | 271.455 | 1.40198 | 0.470753 | 4.43449e-06 | |
9 | 1439163_at | 0.000599004 | 0.0355469 | Zbtb16 | zinc finger and BTB domain containing 16 | TF | 18.4604 | 0.872269 | 0.708018 | 443.373 | 766.321 | 1.34776 | 1.74312 | 0.00134143 |
10 | 1435188_at | 0.00014304 | 0.0155827 | Gm129 | predicted gene 129 | 14.4647 | 0.900766 | 0.742931 | 224.65 | 208.43 | 1.30091 | 1.24026 | 0.000463404 | |
11 | 1452318_a_at | 0.000396616 | 0.0283933 | Hspa1b | heat shock protein 1B | 20.0079 | 0.754075 | 0.865426 | 1135.15 | 1054.16 | 1.27044 | 1.51038 | 0.0208743 | |
12 | 1449528_at | 1.46247e-05 | 0.00499768 | Figf | c-fos induced growth factor | 10.6018 | 0.976751 | 0.407751 | 840.629 | 269.084 | 1.26761 | 0.554548 | 2.21725e-06 | |
13 | 1421037_at | 2.89781e-05 | 0.00660072 | Npas2 | neuronal PAS domain protein 2 | TF | 3.90781 | 0.848382 | 0.889713 | 79.9658 | 52.8328 | 1.26381 | 0.90411 | 0.0027638 |
14 | 1433398_at | 1.04788e-07 | 0.000322535 | Fgd3 | FYVE, RhoGEF and PH domain containing 3 | 3.85734 | 0.961562 | 0.895681 | 220.316 | 161.464 | 1.24401 | 0.951477 | 8.86898e-06 | |
15 | 1433733_a_at | 7.51138e-05 | 0.0108929 | Cry1 | cryptochrome 1 (photolyase-like) | TF | 22.0826 | 0.860559 | 0.84623 | 205.993 | 157.651 | 1.20166 | 0.960012 | 0.00195894 |
16 | 1448276_at | 0.000238321 | 0.021117 | Tspan4 | tetraspanin 4 | 16.1025 | 0.871265 | 0.775064 | 393.493 | 273.071 | 1.1317 | 0.819673 | 0.00139354 | |
17 | 1417602_at | 1.1134e-08 | 0.000145124 | Per2 | period homolog 2 (Drosophila) | TF | 17.1449 | 0.971705 | 0.929008 | 323.916 | 431.892 | 1.11776 | 1.15459 | 4.43449e-06 |
18 | 1436387_at | 0.000313998 | 0.0248014 | C330006P03Rik | RIKEN cDNA C330006P03 gene | 22.1427 | 0.778634 | 0.859556 | 259.909 | 250.86 | 1.08159 | 0.872747 | 0.0135962 | |
19 | 1452385_at | 0.000580133 | 0.0348861 | Usp53 | ubiquitin specific peptidase 53 | 16.706 | 0.787561 | 0.82787 | 410.226 | 418.335 | 1.06623 | 0.418796 | 0.0114122 | |
20 | 1426464_at | 4.44775e-07 | 0.000673185 | Nr1d1 | nuclear receptor subfamily 1, group D, member 1 | TF NR | 10.1297 | 0.951303 | 0.877252 | 335.583 | 269.552 | 1.03792 | 1.02136 | 2.10638e-05 |
21 | 1452388_at | 0.000814988 | 0.0407044 | Hspa1a | heat shock protein 1A | 20.9348 | 0.803374 | 0.797022 | 559.716 | 538.602 | 1.01929 | 1.38141 | 0.00826257 | |
22 | 1429169_at | 1.12042e-06 | 0.00129569 | Rbm3 | RNA binding motif protein 3 | 19.0031 | 0.876189 | 0.940789 | 154.642 | 136.011 | 0.994051 | 0.912254 | 0.00117403 | |
23 | 1435158_at | 0.00100667 | 0.0454974 | Rbm12b | RNA binding motif protein 12B | 18.7025 | 0.748976 | 0.830762 | 94.0712 | 66.2183 | 0.980258 | 0.444173 | 0.022658 | |
24 | 1427883_a_at | 0.000661686 | 0.0372104 | Col3a1 | collagen, type III, alpha 1 | CA EM SP | 4.85759 | 0.738489 | 0.854693 | 1197.33 | 434.507 | 0.968715 | 0.354469 | 0.0267655 |
25 | 1458176_at | 9.1288e-06 | 0.00361156 | Per3 | period homolog 3 (Drosophila) | TF | 14.8303 | 0.93594 | 0.803388 | 784.514 | 748.265 | 0.962534 | 0.822345 | 7.20605e-05 |
TF=Transcription Factor;
Ch=Channel;
GPCR=GPCR;
CA=Cell Adhesion;
EM=Extracellular Matrix;
SP=Structural Protein;
Ng=Neurogenesis;
Hox=Homeobox;
NR=Nuclear Receptor;
NH/NT=NH/NT;
AG=Axon Guidance;
SLC=SLC Transporter;
Fox=Forkhead