Photoperiodism

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Photoperiodism: 24-h rhythmic genes

24-h rhythmic genes both in short-day and long-day conditions (Help)

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Probe set ID P-value FDR Symbol Name Gene Category phase (short day) phase (long day) max. correl. (short day) max. correl. (long day) amplitude (short day) amplitude (long day) [desc] rel. amplitude (short day) rel. amplitude (long day)
76 1416121_at [new page][B* page] 2.13434e-07 0.000418525 Lox lysyl oxidase EM 5.19652 0.899957 0.949313 114.355 76.4427 0.660732 0.429253 0.000474491
77 1445815_at [new page][B* page] 5.47428e-06 0.00272014 Fzd8 frizzled homolog 8 (Drosophila) GPCR AG 7.31588 0.826989 0.935579 40.2794 20.5186 0.65946 0.3481 0.00478371
78 1459994_x_at [new page][B* page] 0.000373643 0.0276262 Trfr2 transferrin receptor 2 8.82703 0.752236 0.86834 130.181 71.5994 0.654267 0.38652 0.021515
79 1424175_at [new page][B* page] 4.82814e-05 0.00857298 Tef thyrotroph embryonic factor TF 15.0887 0.906334 0.796375 1586.76 1355.38 0.653908 0.537433 0.000372497
80 1416773_at [new page][B* page] 3.18297e-05 0.00693677 Wee1 WEE 1 homolog 1 (S. pombe) 17.6433 0.866686 0.87136 585.159 657.192 0.653446 0.59822 0.00163744
81 1451451_at [new page][B* page] 0.000769468 0.0395626 Gca grancalcin 16.405 0.789169 0.813243 113.74 149.765 0.649388 0.442333 0.0110441
82 1452944_at [new page][B* page] 0.00103056 0.0458834 Afmid arylformamidase 8.13993 0.88213 0.627184 99.1532 31.2898 0.644259 0.310372 0.000981131
83 1423250_a_at [new page][B* page] 6.4411e-05 0.010167 Tgfb2 transforming growth factor, beta 2 CA EM Ng NH/NT 10.1513 0.866708 0.845634 278.529 348.927 0.640918 0.664757 0.00163522
84 1448383_at [new page][B* page] 1.51566e-08 0.000145124 Mmp14 matrix metallopeptidase 14 (membrane-inserted) CA EM Ng 4.79969 0.964712 0.931257 482.415 448.815 0.640055 0.619028 6.65174e-06
85 1440742_at [new page][B* page] 0.000167878 0.016863 8.86158 0.868672 0.798856 75.8435 39.7671 0.635861 0.382854 0.00152103
86 1434724_at [new page][B* page] 9.07016e-05 0.0119263 Usp31 ubiquitin specific peptidase 31 19.7561 0.817396 0.876395 379.503 328.625 0.635116 0.366675 0.00604643
87 1427122_at [new page][B* page] 0.000592992 0.035283 Copg2as2 coatomer protein complex, subunit gamma 2, antisense 2 13.9108 0.651772 0.89199 149.015 130.365 0.632144 0.421426 0.0804505
88 1422562_at [new page][B* page] 0.00045566 0.0308999 Rrad Ras-related associated with diabetes 20.7554 0.652144 0.898644 142.982 104.692 0.62841 0.576282 0.0801423
89 1424542_at [new page][B* page] 1.52676e-07 0.000380413 S100a4 S100 calcium binding protein A4 8.43146 0.949109 0.910082 41.684 34.7298 0.624906 0.626271 2.43897e-05
90 1430618_at [new page][B* page] 0.00120381 0.0493667 2610020C07Rik RIKEN cDNA 2610020C07 gene 13.207 0.781993 0.797028 41.3415 22.3036 0.623666 0.36416 0.0127336
91 1436789_at [new page][B* page] 8.96859e-06 0.00357958 Ccnjl cyclin J-like 2.28789 0.946722 0.766198 74.8233 46.7173 0.622907 0.566401 3.43673e-05
92 1449851_at [new page][B* page] 0.00105847 0.0464331 Per1 period homolog 1 (Drosophila) TF 18.6702 0.894675 0.568947 396.637 355.108 0.622809 0.575102 0.000607525
93 1419765_at [new page][B* page] 1.47899e-06 0.00151599 Cul2 cullin 2 8.2737 0.928632 0.889369 150.224 101.034 0.620782 0.440996 0.00011308
94 1438972_x_at [new page][B* page] 4.33881e-05 0.00826035 2810410L24Rik RIKEN cDNA 2810410L24 gene 8.9948 0.830214 0.890628 352.73 171.211 0.618917 0.312524 0.00440788
95 1418025_at [new page][B* page] 0.000196432 0.0186119 Bhlhe40 basic helix-loop-helix family, member e40 TF 13.8664 0.832139 0.83517 645.237 401.966 0.618811 0.344882 0.00420501
96 1421830_at [new page][B* page] 0.000392038 0.0283662 Ak4 adenylate kinase 4 18.9869 0.777419 0.851993 197.837 113.164 0.616694 0.430812 0.0138766
97 1428052_a_at [new page][B* page] 3.62929e-05 0.00747417 Zmym1 zinc finger, MYM domain containing 1 19.9436 0.831115 0.894695 278.458 274.053 0.61047 0.709819 0.00431254
98 1416591_at [new page][B* page] 3.09448e-05 0.00686867 Rab34 RAB34, member of RAS oncogene family 9.5423 0.888153 0.847937 721.413 284.604 0.609918 0.30538 0.000790448
99 1426100_a_at [new page][B* page] 3.34692e-05 0.00718134 Tk2 thymidine kinase 2, mitochondrial 7.66186 0.771455 0.923844 254.842 56.6585 0.609262 0.190176 0.0154697
100 1419149_at [new page][B* page] 0.000735157 0.038734 Serpine1 serine (or cysteine) peptidase inhibitor, clade E, member 1 14.7938 0.894993 0.615672 36.4557 15.5138 0.60809 0.291328 0.000604199
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TF=Transcription Factor; Ch=Channel; GPCR=GPCR; CA=Cell Adhesion; EM=Extracellular Matrix; SP=Structural Protein; Ng=Neurogenesis; Hox=Homeobox; NR=Nuclear Receptor; NH/NT=NH/NT; AG=Axon Guidance; SLC=SLC Transporter; Fox=Forkhead
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