Photoperiodism

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Photoperiodism: 24-h rhythmic genes

24-h rhythmic genes both in short-day and long-day conditions (Help)

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Probe set ID P-value FDR [asc] Symbol Name Gene Category phase (short day) phase (long day) max. correl. (short day) max. correl. (long day) amplitude (short day) amplitude (long day) rel. amplitude (short day) rel. amplitude (long day)
26 1449065_at [new page][B* page] 3.80174e-07 0.00065947 Acot1 acyl-CoA thioesterase 1 3.64686 0.981695 0.761862 148.011 144.886 0.399569 0.411876 1.10862e-06
27 1416958_at [new page][B* page] 4.09474e-07 0.000661445 Nr1d2 nuclear receptor subfamily 1, group D, member 2 TF NR 13.9743 0.964089 0.841426 3697.84 3971.74 0.807742 0.703812 6.65174e-06
28 1454960_at [new page][B* page] 4.10644e-07 0.000661445 Smad3 MAD homolog 3 (Drosophila) TF CA 6.20816 0.95014 0.883181 256.175 252.3 0.278491 0.249952 2.32811e-05
29 1426464_at [new page][B* page] 4.44775e-07 0.000673185 Nr1d1 nuclear receptor subfamily 1, group D, member 1 TF NR 10.1297 0.951303 0.877252 335.583 269.552 1.03792 1.02136 2.10638e-05
30 1456161_at [new page][B* page] 4.64223e-07 0.000673185 0610040B10Rik RIKEN cDNA 0610040B10 gene 8.86804 0.932392 0.91515 94.2537 79.3825 0.687726 0.62462 9.75588e-05
31 1451303_at [new page][B* page] 4.68266e-07 0.000673185 BC002230 cDNA sequence BC002230 6.28146 0.901607 0.940327 253.279 120.427 0.40437 0.227287 0.000447884
32 1457350_at [new page][B* page] 4.88684e-07 0.000673185 Per2 period homolog 2 (Drosophila) TF 17.2433 0.954874 0.86736 161.142 164.877 0.853574 0.956844 1.66293e-05
33 1416721_s_at [new page][B* page] 4.92564e-07 0.000673185 Srsf6 serine/arginine-rich splicing factor 6 7.23267 0.897096 0.941994 943.835 819.685 0.317486 0.258366 0.00054766
34 1436458_at [new page][B* page] 5.25589e-07 0.000696706 Sema6a sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A Ng AG 7.99719 0.955283 0.864763 204.701 143.596 0.382712 0.3141 1.66293e-05
35 1424745_at [new page][B* page] 5.40669e-07 0.000696706 Agxt2l2 alanine-glyoxylate aminotransferase 2-like 2 10.2339 0.933654 0.909982 99.4882 46.0189 0.390053 0.225062 9.20157e-05
36 1436893_a_at [new page][B* page] 6.09269e-07 0.000763295 March7 membrane-associated ring finger (C3HC4) 7 7.84494 0.93636 0.899542 825.114 574.461 0.509292 0.31478 6.87346e-05
37 1418892_at [new page][B* page] 8.99774e-07 0.00109678 Rhoj ras homolog gene family, member J 4.70881 0.900312 0.930065 212.823 118.565 0.588897 0.431457 0.000470056
38 1459886_at [new page][B* page] 1.01651e-06 0.00120647 11.1821 0.976991 0.740453 137.326 88.6269 0.456637 0.531187 2.21725e-06
39 1429169_at [new page][B* page] 1.12042e-06 0.00129569 Rbm3 RNA binding motif protein 3 19.0031 0.876189 0.940789 154.642 136.011 0.994051 0.912254 0.00117403
40 1434570_at [new page][B* page] 1.15234e-06 0.00129929 Bend3 BEN domain containing 3 5.95562 0.860223 0.947381 267.703 222.669 0.452742 0.351142 0.00197557
41 1454725_at [new page][B* page] 1.30126e-06 0.00143142 Tra2a transformer 2 alpha homolog (Drosophila) 18.8243 0.904576 0.92101 955.286 728.498 0.540428 0.369866 0.000401321
42 1430798_x_at [new page][B* page] 1.38203e-06 0.00148407 Mrpl15 mitochondrial ribosomal protein L15 8.15697 0.91199 0.914213 72.2421 57.236 0.751682 0.574155 0.00029822
43 1429440_at [new page][B* page] 1.41572e-06 0.00148489 1810041L15Rik RIKEN cDNA 1810041L15 gene 3.19643 0.838987 0.949637 224.222 124.116 0.268711 0.168278 0.00351101
44 1419765_at [new page][B* page] 1.47899e-06 0.00151599 Cul2 cullin 2 8.2737 0.928632 0.889369 150.224 101.034 0.620782 0.440996 0.00011308
45 1448960_at [new page][B* page] 1.59582e-06 0.00157113 Cxxc5 CXXC finger 5 5.19026 0.94276 0.858877 446.144 222.664 0.324103 0.200442 4.54535e-05
46 1423858_a_at [new page][B* page] 1.60244e-06 0.00157113 Hmgcs2 3-hydroxy-3-methylglutaryl-Coenzyme A synthase 2 4.80016 0.87337 0.936118 108.381 70.1245 0.50354 0.367994 0.00129376
47 1455050_at [new page][B* page] 1.65334e-06 0.00158654 E130203B14Rik RIKEN cDNA E130203B14 gene 4.1665 0.938353 0.869126 201.808 175.764 0.484114 0.455096 6.43001e-05
48 1421087_at [new page][B* page] 1.7961e-06 0.00168763 Per3 period homolog 3 (Drosophila) TF 15.9716 0.917927 0.90012 788.503 1032.49 0.604854 0.700807 0.000222833
49 1428644_at [new page][B* page] 1.89148e-06 0.00174097 Mgat5 mannoside acetylglucosaminyltransferase 5 7.75216 0.942151 0.855176 847.012 572.782 0.334627 0.277491 4.87794e-05
50 1438815_at [new page][B* page] 1.99181e-06 0.00179665 Hist2h2aa1 histone cluster 2, H2aa1 8.06201 0.944904 0.847024 20.0159 20.0874 0.446843 0.506566 4.1019e-05
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TF=Transcription Factor; Ch=Channel; GPCR=GPCR; CA=Cell Adhesion; EM=Extracellular Matrix; SP=Structural Protein; Ng=Neurogenesis; Hox=Homeobox; NR=Nuclear Receptor; NH/NT=NH/NT; AG=Axon Guidance; SLC=SLC Transporter; Fox=Forkhead
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