Photoperiodism: 24-h rhythmic genes
24-h rhythmic genes both in short-day and long-day conditions
1 - 25 of 1107 entries
Probe set ID | P-value | FDR | Symbol | Name | Gene Category | phase (short day) | phase (long day) | max. correl. (short day) | max. correl. (long day) | amplitude (short day) | amplitude (long day) | rel. amplitude (short day) | rel. amplitude (long day) | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | 1430746_at | 0.00122468 | 0.0498957 | 1110050P16Rik | RIKEN cDNA 1110050P16 gene | 7.47516 | 0.896112 | 0.540198 | 22.3082 | 9.79031 | 0.40491 | 0.192689 | 0.000578701 | |
2 | 1431202_at | 0.001222 | 0.0498313 | Herc3 | hect domain and RLD 3 | 21.0615 | 0.864425 | 0.664159 | 134.735 | 75.3852 | 0.353042 | 0.185999 | 0.00173721 | |
3 | 1455700_at | 0.00121759 | 0.0497136 | Mterfd3 | MTERF domain containing 3 | TF | 10.4765 | 0.808028 | 0.768109 | 200.326 | 77.2223 | 0.50327 | 0.240202 | 0.00740227 |
4 | 1436003_at | 0.00121801 | 0.0497136 | Vcam1 | vascular cell adhesion molecule 1 | CA | 15.3216 | 0.512027 | 0.899873 | 2.97261 | 2.65017 | 0.177035 | 0.152471 | 0.255133 |
5 | 1452049_at | 0.0012151 | 0.0496846 | Rpl7l1 | ribosomal protein L7-like 1 | 19.3799 | 0.611008 | 0.881339 | 127.361 | 145.767 | 0.222874 | 0.269779 | 0.120105 | |
6 | 1447935_at | 0.00120886 | 0.0494744 | Fancm | Fanconi anemia, complementation group M | 9.88778 | 0.801914 | 0.776286 | 106.439 | 135.643 | 0.31882 | 0.38008 | 0.00851533 | |
7 | 1430618_at | 0.00120381 | 0.0493667 | 2610020C07Rik | RIKEN cDNA 2610020C07 gene | 13.207 | 0.781993 | 0.797028 | 41.3415 | 22.3036 | 0.623666 | 0.36416 | 0.0127336 | |
8 | 1426230_at | 0.0012042 | 0.0493667 | Sphk2 | sphingosine kinase 2 | TF NH/NT | 12.4539 | 0.653151 | 0.868749 | 56.0758 | 73.4284 | 0.335999 | 0.458429 | 0.079302 |
9 | 1443814_x_at | 0.00120513 | 0.0493667 | Ctsh | cathepsin H | 1.91975 | 0.896536 | 0.539417 | 128.658 | 69.6391 | 0.392556 | 0.258876 | 0.000565398 | |
10 | 1424346_at | 0.00120095 | 0.0493296 | Ppp6c | protein phosphatase 6, catalytic subunit | 21.7975 | 0.728244 | 0.835527 | 205.561 | 160.934 | 0.300991 | 0.194472 | 0.0311512 | |
11 | 1456759_at | 0.0011974 | 0.0492288 | Lrrc4c | leucine rich repeat containing 4C | Ng AG | 7.1587 | 0.79771 | 0.781578 | 96.3504 | 42.4675 | 0.502615 | 0.242733 | 0.00928472 |
12 | 1426468_at | 0.00119513 | 0.0491801 | 0610037L13Rik | RIKEN cDNA 0610037L13 gene | 5.13365 | 0.824473 | 0.746774 | 152.655 | 141.547 | 0.22307 | 0.235147 | 0.0050653 | |
13 | 1418603_at | 0.00119021 | 0.0490223 | Avpr1a | arginine vasopressin receptor 1A | GPCR NH/NT | 13.7668 | 0.680512 | 0.859079 | 16.7633 | 15.9385 | 0.388973 | 0.345251 | 0.0583036 |
14 | 1435020_at | 0.00118856 | 0.0489993 | Klhdc2 | kelch domain containing 2 | 11.5215 | 0.766535 | 0.810589 | 458.95 | 407.997 | 0.258679 | 0.229343 | 0.0169065 | |
15 | 1435601_at | 0.00118654 | 0.0489607 | Phlpp2 | PH domain and leucine rich repeat protein phosphatase 2 | 20.886 | 0.816569 | 0.759207 | 317.547 | 344.953 | 0.235686 | 0.271017 | 0.00616505 | |
16 | 1424610_at | 0.00118033 | 0.0487493 | Trub2 | TruB pseudouridine (psi) synthase homolog 2 (E. coli) | 9.75712 | 0.783353 | 0.796751 | 461.186 | 284.087 | 0.586928 | 0.436685 | 0.0123767 | |
17 | 1433794_at | 0.00117858 | 0.0487216 | Setx | senataxin | 13.4685 | 0.596557 | 0.886184 | 593.808 | 642.53 | 0.209407 | 0.212215 | 0.136653 | |
18 | 1450735_at | 0.00117277 | 0.048715 | Pno1 | partner of NOB1 homolog (S. cerevisiae) | 6.0822 | 0.916268 | 0.391955 | 112.805 | 94.3651 | 0.237392 | 0.19396 | 0.000245006 | |
19 | 1438995_at | 0.00117305 | 0.048715 | 23.9642 | 0.569124 | 0.892065 | 14.0617 | 16.9457 | 0.253907 | 0.315158 | 0.171087 | |||
20 | 1433352_at | 0.0011757 | 0.048715 | C430049A07Rik | RIKEN cDNA C430049A07 gene | 13.7231 | 0.660004 | 0.86744 | 12.3808 | 7.33539 | 0.22748 | 0.137149 | 0.0736092 | |
21 | 1426633_s_at | 0.00117582 | 0.048715 | Kctd14 | potassium channel tetramerisation domain containing 14 | Ch | 13.6081 | 0.910486 | 0.446584 | 375.404 | 177.918 | 0.41613 | 0.358184 | 0.000315958 |
22 | 1455007_s_at | 0.00117615 | 0.048715 | Gpt2 | glutamic pyruvate transaminase (alanine aminotransferase) 2 | 20.6008 | 0.760958 | 0.815584 | 70.4956 | 81.165 | 0.380629 | 0.35403 | 0.0186049 | |
23 | 1434860_at | 0.00117707 | 0.048715 | Dpy19l4 | dpy-19-like 4 (C. elegans) | 13.1057 | 0.690524 | 0.855405 | 198.27 | 433.428 | 0.142744 | 0.262255 | 0.0516474 | |
24 | 1438115_a_at | 0.00117734 | 0.048715 | Slc9a3r1 | solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1 | 9.31753 | 0.810706 | 0.766995 | 492.622 | 438.724 | 0.386067 | 0.328687 | 0.00698765 | |
25 | 1437449_at | 0.00116939 | 0.0486987 | Rsad1 | radical S-adenosyl methionine domain containing 1 | 11.9045 | 0.75306 | 0.82151 | 226.83 | 227.579 | 0.356813 | 0.397243 | 0.0212213 |
TF=Transcription Factor;
Ch=Channel;
GPCR=GPCR;
CA=Cell Adhesion;
EM=Extracellular Matrix;
SP=Structural Protein;
Ng=Neurogenesis;
Hox=Homeobox;
NR=Nuclear Receptor;
NH/NT=NH/NT;
AG=Axon Guidance;
SLC=SLC Transporter;
Fox=Forkhead