Photoperiodism

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Photoperiodism: 24-h rhythmic genes

24-h rhythmic genes both in short-day and long-day conditions (Help)

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Probe set ID P-value FDR Symbol Name Gene Category [asc] phase (short day) phase (long day) max. correl. (short day) max. correl. (long day) amplitude (short day) amplitude (long day) rel. amplitude (short day) rel. amplitude (long day)
376 1448276_at [new page][B* page] 0.000238321 0.021117 Tspan4 tetraspanin 4 16.1025 0.871265 0.775064 393.493 273.071 1.1317 0.819673 0.00139354
377 1432011_at [new page][B* page] 0.000239249 0.0211576 2900052L18Rik RIKEN cDNA 2900052L18 gene 8.85725 0.916149 0.649564 138.889 83.483 0.456809 0.330286 0.000246114
378 1435250_at [new page][B* page] 0.000241202 0.0212886 Ints8 integrator complex subunit 8 18.5123 0.872277 0.772375 131.743 182.924 0.301217 0.440336 0.00134033
379 1460712_s_at [new page][B* page] 0.000247261 0.0217807 Ap1g1 adaptor protein complex AP-1, gamma 1 subunit 19.4104 0.759372 0.878459 179.586 167.141 0.215499 0.21192 0.0191204
380 1432059_x_at [new page][B* page] 0.000249842 0.0219394 5031425E22Rik RIKEN cDNA 5031425E22 gene 3.68855 0.898971 0.706629 154.171 136.16 0.360588 0.406413 0.000504423
381 1426258_at [new page][B* page] 0.000250704 0.0219554 Sorl1 sortilin-related receptor, LDLR class A repeats-containing 6.67411 0.847891 0.80684 932.024 1071.39 0.312004 0.294174 0.00279484
382 1448403_at [new page][B* page] 0.000251724 0.022002 Lars leucyl-tRNA synthetase 8.96139 0.876888 0.760993 330.375 233.227 0.290342 0.201421 0.00115186
383 1448829_at [new page][B* page] 0.000253818 0.0220996 Smc6 structural maintenance of chromosomes 6 11.4524 0.740506 0.886895 197.947 240.511 0.336383 0.404107 0.0259285
384 1435744_at [new page][B* page] 0.000253821 0.0220996 6720401G13Rik RIKEN cDNA 6720401G13 gene 12.2158 0.874297 0.765299 117.866 127.963 0.346087 0.357155 0.00124942
385 1455476_a_at [new page][B* page] 0.00025471 0.0221342 Gse1 genetic suppressor element 1 2.09134 0.934486 0.516765 179.641 125.797 0.198673 0.179343 8.75812e-05
386 1436394_at [new page][B* page] 0.000255843 0.0221899 Trim37 tripartite motif-containing 37 8.52353 0.818726 0.836512 120.453 98.5141 0.217854 0.182502 0.00583801
387 1423161_s_at [new page][B* page] 0.000256928 0.0222181 Spred1 sprouty protein with EVH-1 domain 1, related sequence 19.8071 0.86629 0.779988 249.935 273.398 0.331102 0.273752 0.00165296
388 1452903_at [new page][B* page] 0.000257645 0.0222181 6230427J02Rik RIKEN cDNA 6230427J02 gene 8.79041 0.862227 0.785985 61.6344 30.9979 0.310959 0.180547 0.00186803
389 1416606_s_at [new page][B* page] 0.00026079 0.0224463 Nhp2 NHP2 ribonucleoprotein homolog (yeast) 5.44666 0.840729 0.813156 470.848 493.474 0.422152 0.553665 0.00335691
390 1448185_at [new page][B* page] 0.000261357 0.0224523 Herpud1 homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 16.558 0.803741 0.848889 814.014 657.964 0.47155 0.416668 0.00820381
391 1423596_at [new page][B* page] 0.000262217 0.0224833 Nek6 NIMA (never in mitosis gene a)-related expressed kinase 6 7.24318 0.852008 0.799517 96.8667 48.4807 0.259355 0.141596 0.0025077
392 1418501_a_at [new page][B* page] 0.000264555 0.0226088 Oxr1 oxidation resistance 1 11.4015 0.795362 0.854707 523.157 518.552 0.121856 0.114558 0.00978027
393 1452743_at [new page][B* page] 0.000264682 0.0226088 Pole3 polymerase (DNA directed), epsilon 3 (p17 subunit) 5.54339 0.825976 0.828467 203.239 190.253 0.208918 0.181572 0.00490566
394 1416469_at [new page][B* page] 0.000266213 0.0226908 Luzp1 leucine zipper protein 1 21.3126 0.841991 0.810507 78.6554 104.595 0.169316 0.209477 0.00324716
395 1454772_at [new page][B* page] 0.000266649 0.0226908 Snrnp200 small nuclear ribonucleoprotein 200 (U5) 9.32113 0.889963 0.728798 214.971 143.212 0.411545 0.304152 0.000738343
396 1433559_at [new page][B* page] 0.000271017 0.0229704 Slc45a4 solute carrier family 45, member 4 10.5317 0.938357 0.451397 245.615 172.15 0.368437 0.327658 6.43001e-05
397 1433455_at [new page][B* page] 0.000271462 0.0229704 LOC100047863 similar to lymphocyte-specific adaptor protein Lnk 13.5154 0.882692 0.744741 86.5499 35.6711 0.367035 0.192871 0.000958959
398 1425026_at [new page][B* page] 0.000273898 0.0231283 Sft2d2 SFT2 domain containing 2 19.2148 0.659107 0.910462 43.8106 53.5966 0.315895 0.458616 0.0743542
399 1449648_s_at [new page][B* page] 0.000274354 0.0231283 Polr1c polymerase (RNA) I polypeptide C 8.56316 0.761606 0.873692 348.23 254.363 0.192411 0.139818 0.0183965
400 1443979_at [new page][B* page] 0.000274983 0.0231381 A830021K08Rik RIKEN cDNA A830021K08 gene 4.43764 0.830564 0.821951 46.6289 48.8008 0.244415 0.253256 0.00437019
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TF=Transcription Factor; Ch=Channel; GPCR=GPCR; CA=Cell Adhesion; EM=Extracellular Matrix; SP=Structural Protein; Ng=Neurogenesis; Hox=Homeobox; NR=Nuclear Receptor; NH/NT=NH/NT; AG=Axon Guidance; SLC=SLC Transporter; Fox=Forkhead
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