Photoperiodism: 24-h rhythmic genes
24-h rhythmic genes both in short-day and long-day conditions
1 - 25 of 1107 entries
Probe set ID | P-value | FDR | Symbol | Name | Gene Category | phase (short day) | phase (long day) | max. correl. (short day) | max. correl. (long day) | amplitude (short day) | amplitude (long day) | rel. amplitude (short day) | rel. amplitude (long day) | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | 1419367_at | 0.000226149 | 0.0203179 | Decr1 | 2,4-dienoyl CoA reductase 1, mitochondrial | 7.9 | 0.902015 | 0.705053 | 262.468 | 239.289 | 0.244216 | 0.224276 | 0.000443449 | |
2 | 1452467_at | 0.000459036 | 0.0308999 | Mmab | methylmalonic aciduria (cobalamin deficiency) type B homolog (human) | 0.178379 | 0.89697 | 0.657991 | 101.978 | 67.5072 | 0.5126 | 0.290952 | 0.000549877 | |
3 | 1421729_a_at | 0.000501207 | 0.0324361 | Fert2 | fer (fms/fps related) protein kinase, testis specific 2 | CA | 0.226539 | 0.798819 | 0.824748 | 53.455 | 59.7532 | 0.226974 | 0.238143 | 0.0090641 |
4 | 1428067_at | 0.000913063 | 0.0434389 | Rasl12 | RAS-like, family 12 | 0.367998 | 0.902257 | 0.547173 | 30.6092 | 18.3126 | 0.263042 | 0.186635 | 0.000439015 | |
5 | 1425792_a_at | 9.84358e-05 | 0.0124795 | Rorc | RAR-related orphan receptor gamma | TF NR | 0.393449 | 0.781141 | 0.895444 | 26.9521 | 38.1922 | 0.25284 | 0.459437 | 0.0129687 |
6 | 1457407_at | 0.000146225 | 0.0157426 | Robo1 | roundabout homolog 1 (Drosophila) | CA Ng AG | 0.427864 | 0.941346 | 0.526559 | 22.8236 | 34.3363 | 0.305 | 0.354221 | 5.09967e-05 |
7 | 1430546_at | 0.000101463 | 0.0126284 | Cryzl1 | crystallin, zeta (quinone reductase)-like 1 | 0.505401 | 0.877853 | 0.809691 | 336.299 | 406.724 | 0.288762 | 0.333963 | 0.00111527 | |
8 | 1418206_at | 0.00103625 | 0.0458834 | Sdf2l1 | stromal cell-derived factor 2-like 1 | 1.00146 | 0.874498 | 0.650327 | 154.382 | 281.932 | 0.474133 | 0.58373 | 0.00124387 | |
9 | 1448956_at | 0.000382298 | 0.0280358 | Stard10 | START domain containing 10 | 1.09846 | 0.803784 | 0.832778 | 527.464 | 206.681 | 0.426053 | 0.223598 | 0.00819494 | |
10 | 1425550_a_at | 0.000629599 | 0.0364046 | Prkar1a | protein kinase, cAMP dependent regulatory, type I, alpha | 1.18111 | 0.81269 | 0.80061 | 504.422 | 1046.49 | 0.149058 | 0.276268 | 0.00669719 | |
11 | 1454102_at | 0.000608163 | 0.0359162 | 5031425E22Rik | RIKEN cDNA 5031425E22 gene | 1.23042 | 0.903855 | 0.597694 | 38.87 | 39.0511 | 0.310454 | 0.359003 | 0.000416842 | |
12 | 1460167_at | 9.5216e-05 | 0.0122346 | Aldh7a1 | aldehyde dehydrogenase family 7, member A1 | 1.41867 | 0.81602 | 0.875769 | 228.901 | 249.588 | 0.164077 | 0.180606 | 0.00623711 | |
13 | 1435475_at | 8.51397e-06 | 0.0034908 | Lman2l | lectin, mannose-binding 2-like | 1.52512 | 0.937026 | 0.803916 | 695.743 | 747.56 | 0.305542 | 0.343363 | 6.7626e-05 | |
14 | 1434813_x_at | 0.000948281 | 0.044228 | Wars | tryptophanyl-tRNA synthetase | 1.53573 | 0.853501 | 0.713575 | 238.554 | 185.061 | 0.257958 | 0.256455 | 0.00240349 | |
15 | 1434184_s_at | 0.000222566 | 0.0201835 | Map4k4 | mitogen-activated protein kinase kinase kinase kinase 4 | 1.67893 | 0.827805 | 0.83433 | 171.916 | 211.96 | 0.17641 | 0.218686 | 0.004705 | |
16 | 1417240_at | 0.000331039 | 0.0259656 | Zyx | zyxin | CA | 1.76307 | 0.746828 | 0.874827 | 146.787 | 36.9678 | 0.421985 | 0.147867 | 0.0234917 |
17 | 1417461_at | 0.000336979 | 0.0260642 | Cap1 | CAP, adenylate cyclase-associated protein 1 (yeast) | 1.76428 | 0.904228 | 0.662189 | 491.953 | 522.419 | 0.199895 | 0.203238 | 0.00041019 | |
18 | 1423650_at | 0.000930312 | 0.0437477 | Rnf26 | ring finger protein 26 | 1.76913 | 0.922385 | 0.362434 | 74.3914 | 28.3099 | 0.300617 | 0.137551 | 0.000168511 | |
19 | 1457740_at | 0.000563409 | 0.0343692 | Arntl | aryl hydrocarbon receptor nuclear translocator-like | TF | 1.87322 | 0.773933 | 0.839119 | 31.3272 | 38.2811 | 0.253128 | 0.335154 | 0.014799 |
20 | 1443814_x_at | 0.00120513 | 0.0493667 | Ctsh | cathepsin H | 1.91975 | 0.896536 | 0.539417 | 128.658 | 69.6391 | 0.392556 | 0.258876 | 0.000565398 | |
21 | 1424255_at | 0.00113928 | 0.0478867 | Supt5h | suppressor of Ty 5 homolog (S. cerevisiae) | TF | 1.95518 | 0.869585 | 0.656431 | 630.604 | 368.608 | 0.257196 | 0.18447 | 0.00147558 |
22 | 1423588_at | 0.00111003 | 0.047279 | Arpc4 | actin related protein 2/3 complex, subunit 4 | 1.98664 | 0.78853 | 0.795193 | 48.2774 | 62.5405 | 0.283911 | 0.303466 | 0.011186 | |
23 | 1428914_at | 0.000677907 | 0.037296 | 2310014D11Rik | RIKEN cDNA 2310014D11 gene | 1.98922 | 0.763482 | 0.838457 | 246.012 | 347.517 | 0.338363 | 0.468578 | 0.0178311 | |
24 | 1423806_at | 0.000369095 | 0.0274243 | Ints4 | integrator complex subunit 4 | 1.9994 | 0.925004 | 0.52833 | 141.748 | 80.2584 | 0.2195 | 0.150242 | 0.000141904 | |
25 | 1417360_at | 0.0001394 | 0.0154854 | Mlh1 | mutL homolog 1 (E. coli) | 10.0252 | 0.746856 | 0.899772 | 75.0796 | 39.832 | 0.410237 | 0.226195 | 0.0234817 |
TF=Transcription Factor;
Ch=Channel;
GPCR=GPCR;
CA=Cell Adhesion;
EM=Extracellular Matrix;
SP=Structural Protein;
Ng=Neurogenesis;
Hox=Homeobox;
NR=Nuclear Receptor;
NH/NT=NH/NT;
AG=Axon Guidance;
SLC=SLC Transporter;
Fox=Forkhead