Photoperiodism

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Photoperiodism: 24-h rhythmic genes

24-h rhythmic genes both in short-day and long-day conditions (Help)

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Probe set ID P-value FDR Symbol Name Gene Category phase (short day) phase (long day) max. correl. (short day) [asc] max. correl. (long day) amplitude (short day) amplitude (long day) rel. amplitude (short day) rel. amplitude (long day)
1 1438114_x_at [new page][B* page] 0.000863334 0.0419582 Efs embryonal Fyn-associated substrate CA 8.27751 0.934357 0.121977 86.7841 59.2388 0.258742 0.23978 8.86898e-05
2 1428591_at [new page][B* page] 0.00102691 0.0458834 Pnpla2 patatin-like phospholipase domain containing 2 21.3851 0.929833 0.122425 14.2718 9.25536 0.326122 0.233077 0.000107536
3 1456131_x_at [new page][B* page] 0.00116508 0.0485641 Dag1 dystroglycan 1 EM 21.1209 0.926977 0.15392 223.913 166.911 0.280374 0.266005 0.0001286
4 1420373_at [new page][B* page] 0.000158514 0.0163223 Foxj2 forkhead box J2 TF Fox 18.9915 0.957455 0.156107 11.1829 9.74885 0.218117 0.209814 1.44121e-05
5 1432868_at [new page][B* page] 0.00114619 0.048043 Dzip3 DAZ interacting protein 3, zinc finger 8.90207 0.926415 0.192515 40.8365 40.102 0.202037 0.195008 0.000134143
6 1446802_at [new page][B* page] 0.000388029 0.0282067 Atox1 ATX1 (antioxidant protein 1) homolog 1 (yeast) 22.3713 0.943315 0.225038 41.1439 24.9982 0.274427 0.178053 4.32363e-05
7 1430389_at [new page][B* page] 0.00100029 0.0453409 4930509H03Rik RIKEN cDNA 4930509H03 gene 21.0014 0.927139 0.242141 13.7765 5.71629 0.327381 0.147226 0.000127492
8 1441524_at [new page][B* page] 0.000520365 0.0330461 14.4684 0.938419 0.257867 7.67601 8.54997 0.2075 0.237087 6.43001e-05
9 1426830_a_at [new page][B* page] 0.000841752 0.0412889 Ahcyl1 S-adenosylhomocysteine hydrolase-like 1 5.883 0.928685 0.271323 609.653 757.103 0.113627 0.151116 0.00011308
10 1423441_at [new page][B* page] 4.25596e-05 0.00826035 Tfb2m transcription factor B2, mitochondrial TF 8.96852 0.96699 0.277936 162.017 145.857 0.206672 0.170312 4.43449e-06
11 1448418_s_at [new page][B* page] 0.000393982 0.0283662 Dcaf11 DDB1 and CUL4 associated factor 11 8.27705 0.941612 0.278029 653.59 302.016 0.219878 0.119734 4.9888e-05
12 1416086_at [new page][B* page] 0.000963064 0.0445489 Tpst2 protein-tyrosine sulfotransferase 2 4.28117 0.925037 0.299484 226.021 49.8892 0.381525 0.114808 0.000141904
13 1418698_a_at [new page][B* page] 0.000177214 0.0175276 Fech ferrochelatase 10.0708 0.950042 0.316469 149.063 99.5643 0.20839 0.151915 2.32811e-05
14 1456201_at [new page][B* page] 6.75132e-05 0.010359 4632427E13Rik RIKEN cDNA 4632427E13 gene 4.4132 0.962146 0.341499 457.652 197.91 0.383052 0.160636 8.86898e-06
15 1438905_x_at [new page][B* page] 0.000214647 0.0198252 C030046I01Rik RIKEN cDNA C030046I01 gene 9.41046 0.947545 0.350219 56.7089 55.3399 0.265108 0.230531 3.21501e-05
16 1423650_at [new page][B* page] 0.000930312 0.0437477 Rnf26 ring finger protein 26 1.76913 0.922385 0.362434 74.3914 28.3099 0.300617 0.137551 0.000168511
17 1439107_a_at [new page][B* page] 0.000136547 0.0152815 Mll5 myeloid/lymphoid or mixed-lineage leukemia 5 TF 12.7512 0.951558 0.36906 188.129 96.693 0.393969 0.205537 2.10638e-05
18 1450735_at [new page][B* page] 0.00117277 0.048715 Pno1 partner of NOB1 homolog (S. cerevisiae) 6.0822 0.916268 0.391955 112.805 94.3651 0.237392 0.19396 0.000245006
19 1438320_s_at [new page][B* page] 0.000106575 0.0130615 Mcm7 minichromosome maintenance deficient 7 (S. cerevisiae) TF 9.89822 0.953524 0.393133 318.48 144.305 0.332768 0.146717 1.7738e-05
20 1449528_at [new page][B* page] 1.46247e-05 0.00499768 Figf c-fos induced growth factor 10.6018 0.976751 0.407751 840.629 269.084 1.26761 0.554548 2.21725e-06
21 1418883_a_at [new page][B* page] 0.000827817 0.0409829 Pabpc1 poly(A) binding protein, cytoplasmic 1 10.8741 0.92097 0.418825 1308.88 448.47 0.274861 0.0873718 0.000187357
22 1438953_at [new page][B* page] 1.35166e-05 0.00482926 Figf c-fos induced growth factor 8.93867 0.976421 0.426312 653.245 288.666 1.45564 0.529256 2.21725e-06
23 1454658_at [new page][B* page] 0.000542415 0.0334845 Ilvbl ilvB (bacterial acetolactate synthase)-like 7.74974 0.927902 0.426846 296.9 102.004 0.255096 0.138532 0.000121949
24 1430630_at [new page][B* page] 0.000645642 0.0366278 9.50872 0.923521 0.439926 10.414 4.95263 0.391431 0.200434 0.000157424
25 1426633_s_at [new page][B* page] 0.00117582 0.048715 Kctd14 potassium channel tetramerisation domain containing 14 Ch 13.6081 0.910486 0.446584 375.404 177.918 0.41613 0.358184 0.000315958
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TF=Transcription Factor; Ch=Channel; GPCR=GPCR; CA=Cell Adhesion; EM=Extracellular Matrix; SP=Structural Protein; Ng=Neurogenesis; Hox=Homeobox; NR=Nuclear Receptor; NH/NT=NH/NT; AG=Axon Guidance; SLC=SLC Transporter; Fox=Forkhead
Copyright © 2010 RIKEN Center for developmental Biology.