Photoperiodism: 24-h rhythmic genes
24-h rhythmic genes both in short-day and long-day conditions
1 - 25 of 1107 entries
Probe set ID | P-value | FDR | Symbol | Name | Gene Category | phase (short day) | phase (long day) | max. correl. (short day) | max. correl. (long day) | amplitude (short day) | amplitude (long day) | rel. amplitude (short day) | rel. amplitude (long day) | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | 1438114_x_at | 0.000863334 | 0.0419582 | Efs | embryonal Fyn-associated substrate | CA | 8.27751 | 0.934357 | 0.121977 | 86.7841 | 59.2388 | 0.258742 | 0.23978 | 8.86898e-05 |
2 | 1428591_at | 0.00102691 | 0.0458834 | Pnpla2 | patatin-like phospholipase domain containing 2 | 21.3851 | 0.929833 | 0.122425 | 14.2718 | 9.25536 | 0.326122 | 0.233077 | 0.000107536 | |
3 | 1456131_x_at | 0.00116508 | 0.0485641 | Dag1 | dystroglycan 1 | EM | 21.1209 | 0.926977 | 0.15392 | 223.913 | 166.911 | 0.280374 | 0.266005 | 0.0001286 |
4 | 1420373_at | 0.000158514 | 0.0163223 | Foxj2 | forkhead box J2 | TF Fox | 18.9915 | 0.957455 | 0.156107 | 11.1829 | 9.74885 | 0.218117 | 0.209814 | 1.44121e-05 |
5 | 1432868_at | 0.00114619 | 0.048043 | Dzip3 | DAZ interacting protein 3, zinc finger | 8.90207 | 0.926415 | 0.192515 | 40.8365 | 40.102 | 0.202037 | 0.195008 | 0.000134143 | |
6 | 1446802_at | 0.000388029 | 0.0282067 | Atox1 | ATX1 (antioxidant protein 1) homolog 1 (yeast) | 22.3713 | 0.943315 | 0.225038 | 41.1439 | 24.9982 | 0.274427 | 0.178053 | 4.32363e-05 | |
7 | 1430389_at | 0.00100029 | 0.0453409 | 4930509H03Rik | RIKEN cDNA 4930509H03 gene | 21.0014 | 0.927139 | 0.242141 | 13.7765 | 5.71629 | 0.327381 | 0.147226 | 0.000127492 | |
8 | 1441524_at | 0.000520365 | 0.0330461 | 14.4684 | 0.938419 | 0.257867 | 7.67601 | 8.54997 | 0.2075 | 0.237087 | 6.43001e-05 | |||
9 | 1426830_a_at | 0.000841752 | 0.0412889 | Ahcyl1 | S-adenosylhomocysteine hydrolase-like 1 | 5.883 | 0.928685 | 0.271323 | 609.653 | 757.103 | 0.113627 | 0.151116 | 0.00011308 | |
10 | 1423441_at | 4.25596e-05 | 0.00826035 | Tfb2m | transcription factor B2, mitochondrial | TF | 8.96852 | 0.96699 | 0.277936 | 162.017 | 145.857 | 0.206672 | 0.170312 | 4.43449e-06 |
11 | 1448418_s_at | 0.000393982 | 0.0283662 | Dcaf11 | DDB1 and CUL4 associated factor 11 | 8.27705 | 0.941612 | 0.278029 | 653.59 | 302.016 | 0.219878 | 0.119734 | 4.9888e-05 | |
12 | 1416086_at | 0.000963064 | 0.0445489 | Tpst2 | protein-tyrosine sulfotransferase 2 | 4.28117 | 0.925037 | 0.299484 | 226.021 | 49.8892 | 0.381525 | 0.114808 | 0.000141904 | |
13 | 1418698_a_at | 0.000177214 | 0.0175276 | Fech | ferrochelatase | 10.0708 | 0.950042 | 0.316469 | 149.063 | 99.5643 | 0.20839 | 0.151915 | 2.32811e-05 | |
14 | 1456201_at | 6.75132e-05 | 0.010359 | 4632427E13Rik | RIKEN cDNA 4632427E13 gene | 4.4132 | 0.962146 | 0.341499 | 457.652 | 197.91 | 0.383052 | 0.160636 | 8.86898e-06 | |
15 | 1438905_x_at | 0.000214647 | 0.0198252 | C030046I01Rik | RIKEN cDNA C030046I01 gene | 9.41046 | 0.947545 | 0.350219 | 56.7089 | 55.3399 | 0.265108 | 0.230531 | 3.21501e-05 | |
16 | 1423650_at | 0.000930312 | 0.0437477 | Rnf26 | ring finger protein 26 | 1.76913 | 0.922385 | 0.362434 | 74.3914 | 28.3099 | 0.300617 | 0.137551 | 0.000168511 | |
17 | 1439107_a_at | 0.000136547 | 0.0152815 | Mll5 | myeloid/lymphoid or mixed-lineage leukemia 5 | TF | 12.7512 | 0.951558 | 0.36906 | 188.129 | 96.693 | 0.393969 | 0.205537 | 2.10638e-05 |
18 | 1450735_at | 0.00117277 | 0.048715 | Pno1 | partner of NOB1 homolog (S. cerevisiae) | 6.0822 | 0.916268 | 0.391955 | 112.805 | 94.3651 | 0.237392 | 0.19396 | 0.000245006 | |
19 | 1438320_s_at | 0.000106575 | 0.0130615 | Mcm7 | minichromosome maintenance deficient 7 (S. cerevisiae) | TF | 9.89822 | 0.953524 | 0.393133 | 318.48 | 144.305 | 0.332768 | 0.146717 | 1.7738e-05 |
20 | 1449528_at | 1.46247e-05 | 0.00499768 | Figf | c-fos induced growth factor | 10.6018 | 0.976751 | 0.407751 | 840.629 | 269.084 | 1.26761 | 0.554548 | 2.21725e-06 | |
21 | 1418883_a_at | 0.000827817 | 0.0409829 | Pabpc1 | poly(A) binding protein, cytoplasmic 1 | 10.8741 | 0.92097 | 0.418825 | 1308.88 | 448.47 | 0.274861 | 0.0873718 | 0.000187357 | |
22 | 1438953_at | 1.35166e-05 | 0.00482926 | Figf | c-fos induced growth factor | 8.93867 | 0.976421 | 0.426312 | 653.245 | 288.666 | 1.45564 | 0.529256 | 2.21725e-06 | |
23 | 1454658_at | 0.000542415 | 0.0334845 | Ilvbl | ilvB (bacterial acetolactate synthase)-like | 7.74974 | 0.927902 | 0.426846 | 296.9 | 102.004 | 0.255096 | 0.138532 | 0.000121949 | |
24 | 1430630_at | 0.000645642 | 0.0366278 | 9.50872 | 0.923521 | 0.439926 | 10.414 | 4.95263 | 0.391431 | 0.200434 | 0.000157424 | |||
25 | 1426633_s_at | 0.00117582 | 0.048715 | Kctd14 | potassium channel tetramerisation domain containing 14 | Ch | 13.6081 | 0.910486 | 0.446584 | 375.404 | 177.918 | 0.41613 | 0.358184 | 0.000315958 |
TF=Transcription Factor;
Ch=Channel;
GPCR=GPCR;
CA=Cell Adhesion;
EM=Extracellular Matrix;
SP=Structural Protein;
Ng=Neurogenesis;
Hox=Homeobox;
NR=Nuclear Receptor;
NH/NT=NH/NT;
AG=Axon Guidance;
SLC=SLC Transporter;
Fox=Forkhead