Photoperiodism: 24-h rhythmic genes
24-h rhythmic genes both in short-day and long-day conditions
1 - 25 of 1107 entries
Probe set ID | P-value | FDR | Symbol | Name | Gene Category | phase (short day) | phase (long day) | max. correl. (short day) | max. correl. (long day) | amplitude (short day) | amplitude (long day) | rel. amplitude (short day) | rel. amplitude (long day) | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | 1429269_at | 0.000301238 | 0.0244795 | BC068157 | cDNA sequence BC068157 | 6.31314 | 0.810751 | 0.836524 | 636.002 | 196 | 0.471386 | 0.226712 | 0.00698432 | |
2 | 1436686_at | 0.000910342 | 0.0433552 | Zfp706 | zinc finger protein 706 | 14.5367 | 0.897314 | 0.57537 | 3.79918 | 1.45704 | 0.302611 | 0.122851 | 0.000541008 | |
3 | 1437459_x_at | 0.00104874 | 0.0461906 | Slc25a19 | solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19 | SLC | 12.0818 | 0.508031 | 0.904745 | 2.6028 | 1.86632 | 0.167516 | 0.12781 | 0.261746 |
4 | 1454106_a_at | 0.00104075 | 0.0458834 | Cxxc1 | CXXC finger 1 (PHD domain) | TF | 21.6194 | 0.8669 | 0.673855 | 16.1336 | 10.2049 | 0.368953 | 0.20831 | 0.00162081 |
5 | 1442191_at | 0.000116215 | 0.013721 | 5033411D12Rik | RIKEN cDNA 5033411D12 gene | 9.8815 | 0.815238 | 0.869958 | 8.18941 | 10.2674 | 0.311784 | 0.34689 | 0.00634465 | |
6 | 1427622_at | 0.000914449 | 0.043459 | Tmed8 | transmembrane emp24 domain containing 8 | 23.4203 | 0.913729 | 0.473641 | 13.8 | 10.275 | 0.201962 | 0.15907 | 0.000276047 | |
7 | 1438247_at | 0.000993218 | 0.0452476 | Klhl15 | kelch-like 15 (Drosophila) | 6.97801 | 0.762616 | 0.822105 | 12.7659 | 10.632 | 0.427904 | 0.324829 | 0.0180861 | |
8 | 1458640_at | 2.19722e-05 | 0.00595422 | 10.1821 | 0.855441 | 0.892252 | 26.3253 | 10.6473 | 0.596032 | 0.252875 | 0.00226492 | |||
9 | 1447528_at | 0.000855672 | 0.0417207 | 8.88983 | 0.857835 | 0.712189 | 13.0008 | 10.8574 | 0.414255 | 0.340318 | 0.00210417 | |||
10 | 1459736_at | 0.000720733 | 0.0383323 | 22.032 | 0.778223 | 0.825256 | 4.88688 | 10.9628 | 0.174016 | 0.38967 | 0.0136682 | |||
11 | 1447223_at | 2.41538e-05 | 0.00612001 | 10.6467 | 0.922989 | 0.791163 | 103.612 | 100.151 | 0.437825 | 0.4522 | 0.000159642 | |||
12 | 1441281_s_at | 0.000716137 | 0.0381779 | Ninj1 | ninjurin 1 | CA | 3.55264 | 0.825462 | 0.778479 | 272.312 | 100.292 | 0.533491 | 0.334518 | 0.00495444 |
13 | 1420058_s_at | 0.000665396 | 0.037296 | Fam54b | family with sequence similarity 54, member B | 7.11652 | 0.900021 | 0.601113 | 253.195 | 100.435 | 0.282349 | 0.129178 | 0.000474491 | |
14 | 1426955_at | 7.02317e-05 | 0.0105233 | Col18a1 | collagen, type XVIII, alpha 1 | CA EM SP | 5.35597 | 0.842243 | 0.866161 | 209.467 | 100.805 | 0.383233 | 0.282995 | 0.0032272 |
15 | 1452982_at | 0.000496555 | 0.0322696 | Igf1r | insulin-like growth factor I receptor | Ng NH/NT | 6.27797 | 0.843368 | 0.775829 | 457.252 | 1003.82 | 0.373963 | 0.749184 | 0.00315736 |
16 | 1419765_at | 1.47899e-06 | 0.00151599 | Cul2 | cullin 2 | 8.2737 | 0.928632 | 0.889369 | 150.224 | 101.034 | 0.620782 | 0.440996 | 0.00011308 | |
17 | 1450777_at | 0.000657377 | 0.0370605 | Xrn2 | 5'-3' exoribonuclease 2 | TF | 9.63853 | 0.87517 | 0.692193 | 126.579 | 101.114 | 0.258497 | 0.204255 | 0.00121505 |
18 | 1454846_at | 0.000827558 | 0.0409829 | Utp15 | UTP15, U3 small nucleolar ribonucleoprotein, homolog (yeast) | 12.5402 | 0.754101 | 0.835975 | 99.0557 | 102.002 | 0.255499 | 0.239678 | 0.0208643 | |
19 | 1454658_at | 0.000542415 | 0.0334845 | Ilvbl | ilvB (bacterial acetolactate synthase)-like | 7.74974 | 0.927902 | 0.426846 | 296.9 | 102.004 | 0.255096 | 0.138532 | 0.000121949 | |
20 | 1438075_at | 6.45939e-06 | 0.00288441 | Fem1c | fem-1 homolog c (C.elegans) | 7.48382 | 0.739135 | 0.956153 | 110.844 | 102.534 | 0.324229 | 0.283029 | 0.0265016 | |
21 | 1416756_at | 0.000771939 | 0.0395627 | Dnajb1 | DnaJ (Hsp40) homolog, subfamily B, member 1 | 20.5644 | 0.869756 | 0.693006 | 104.052 | 103.253 | 0.48313 | 0.669979 | 0.0014656 | |
22 | 1458710_at | 4.45761e-05 | 0.00841183 | 10.284 | 0.814287 | 0.898988 | 124.861 | 103.448 | 0.350831 | 0.31973 | 0.00648323 | |||
23 | 1447517_at | 0.000429812 | 0.0299483 | Skiv2l2 | superkiller viralicidic activity 2-like 2 (S. cerevisiae) | 10.7316 | 0.834667 | 0.795529 | 167.111 | 103.536 | 0.288909 | 0.196384 | 0.00395002 | |
24 | 1438786_a_at | 0.00109052 | 0.0470656 | 2610021A01Rik | RIKEN cDNA 2610021A01 gene | 18.03 | 0.74194 | 0.83167 | 69.0257 | 103.668 | 0.261669 | 0.359458 | 0.025342 | |
25 | 1421087_at | 1.7961e-06 | 0.00168763 | Per3 | period homolog 3 (Drosophila) | TF | 15.9716 | 0.917927 | 0.90012 | 788.503 | 1032.49 | 0.604854 | 0.700807 | 0.000222833 |
TF=Transcription Factor;
Ch=Channel;
GPCR=GPCR;
CA=Cell Adhesion;
EM=Extracellular Matrix;
SP=Structural Protein;
Ng=Neurogenesis;
Hox=Homeobox;
NR=Nuclear Receptor;
NH/NT=NH/NT;
AG=Axon Guidance;
SLC=SLC Transporter;
Fox=Forkhead