Photoperiodism

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Photoperiodism: 24-h rhythmic genes

24-h rhythmic genes both in short-day and long-day conditions (Help)

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Probe set ID P-value FDR Symbol Name Gene Category phase (short day) phase (long day) max. correl. (short day) max. correl. (long day) amplitude (short day) [asc] amplitude (long day) rel. amplitude (short day) rel. amplitude (long day)
1 1429269_at [new page][B* page] 0.000301238 0.0244795 BC068157 cDNA sequence BC068157 6.31314 0.810751 0.836524 636.002 196 0.471386 0.226712 0.00698432
2 1436686_at [new page][B* page] 0.000910342 0.0433552 Zfp706 zinc finger protein 706 14.5367 0.897314 0.57537 3.79918 1.45704 0.302611 0.122851 0.000541008
3 1437459_x_at [new page][B* page] 0.00104874 0.0461906 Slc25a19 solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19 SLC 12.0818 0.508031 0.904745 2.6028 1.86632 0.167516 0.12781 0.261746
4 1454106_a_at [new page][B* page] 0.00104075 0.0458834 Cxxc1 CXXC finger 1 (PHD domain) TF 21.6194 0.8669 0.673855 16.1336 10.2049 0.368953 0.20831 0.00162081
5 1442191_at [new page][B* page] 0.000116215 0.013721 5033411D12Rik RIKEN cDNA 5033411D12 gene 9.8815 0.815238 0.869958 8.18941 10.2674 0.311784 0.34689 0.00634465
6 1427622_at [new page][B* page] 0.000914449 0.043459 Tmed8 transmembrane emp24 domain containing 8 23.4203 0.913729 0.473641 13.8 10.275 0.201962 0.15907 0.000276047
7 1438247_at [new page][B* page] 0.000993218 0.0452476 Klhl15 kelch-like 15 (Drosophila) 6.97801 0.762616 0.822105 12.7659 10.632 0.427904 0.324829 0.0180861
8 1458640_at [new page][B* page] 2.19722e-05 0.00595422 10.1821 0.855441 0.892252 26.3253 10.6473 0.596032 0.252875 0.00226492
9 1447528_at [new page][B* page] 0.000855672 0.0417207 8.88983 0.857835 0.712189 13.0008 10.8574 0.414255 0.340318 0.00210417
10 1459736_at [new page][B* page] 0.000720733 0.0383323 22.032 0.778223 0.825256 4.88688 10.9628 0.174016 0.38967 0.0136682
11 1447223_at [new page][B* page] 2.41538e-05 0.00612001 10.6467 0.922989 0.791163 103.612 100.151 0.437825 0.4522 0.000159642
12 1441281_s_at [new page][B* page] 0.000716137 0.0381779 Ninj1 ninjurin 1 CA 3.55264 0.825462 0.778479 272.312 100.292 0.533491 0.334518 0.00495444
13 1420058_s_at [new page][B* page] 0.000665396 0.037296 Fam54b family with sequence similarity 54, member B 7.11652 0.900021 0.601113 253.195 100.435 0.282349 0.129178 0.000474491
14 1426955_at [new page][B* page] 7.02317e-05 0.0105233 Col18a1 collagen, type XVIII, alpha 1 CA EM SP 5.35597 0.842243 0.866161 209.467 100.805 0.383233 0.282995 0.0032272
15 1452982_at [new page][B* page] 0.000496555 0.0322696 Igf1r insulin-like growth factor I receptor Ng NH/NT 6.27797 0.843368 0.775829 457.252 1003.82 0.373963 0.749184 0.00315736
16 1419765_at [new page][B* page] 1.47899e-06 0.00151599 Cul2 cullin 2 8.2737 0.928632 0.889369 150.224 101.034 0.620782 0.440996 0.00011308
17 1450777_at [new page][B* page] 0.000657377 0.0370605 Xrn2 5'-3' exoribonuclease 2 TF 9.63853 0.87517 0.692193 126.579 101.114 0.258497 0.204255 0.00121505
18 1454846_at [new page][B* page] 0.000827558 0.0409829 Utp15 UTP15, U3 small nucleolar ribonucleoprotein, homolog (yeast) 12.5402 0.754101 0.835975 99.0557 102.002 0.255499 0.239678 0.0208643
19 1454658_at [new page][B* page] 0.000542415 0.0334845 Ilvbl ilvB (bacterial acetolactate synthase)-like 7.74974 0.927902 0.426846 296.9 102.004 0.255096 0.138532 0.000121949
20 1438075_at [new page][B* page] 6.45939e-06 0.00288441 Fem1c fem-1 homolog c (C.elegans) 7.48382 0.739135 0.956153 110.844 102.534 0.324229 0.283029 0.0265016
21 1416756_at [new page][B* page] 0.000771939 0.0395627 Dnajb1 DnaJ (Hsp40) homolog, subfamily B, member 1 20.5644 0.869756 0.693006 104.052 103.253 0.48313 0.669979 0.0014656
22 1458710_at [new page][B* page] 4.45761e-05 0.00841183 10.284 0.814287 0.898988 124.861 103.448 0.350831 0.31973 0.00648323
23 1447517_at [new page][B* page] 0.000429812 0.0299483 Skiv2l2 superkiller viralicidic activity 2-like 2 (S. cerevisiae) 10.7316 0.834667 0.795529 167.111 103.536 0.288909 0.196384 0.00395002
24 1438786_a_at [new page][B* page] 0.00109052 0.0470656 2610021A01Rik RIKEN cDNA 2610021A01 gene 18.03 0.74194 0.83167 69.0257 103.668 0.261669 0.359458 0.025342
25 1421087_at [new page][B* page] 1.7961e-06 0.00168763 Per3 period homolog 3 (Drosophila) TF 15.9716 0.917927 0.90012 788.503 1032.49 0.604854 0.700807 0.000222833
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TF=Transcription Factor; Ch=Channel; GPCR=GPCR; CA=Cell Adhesion; EM=Extracellular Matrix; SP=Structural Protein; Ng=Neurogenesis; Hox=Homeobox; NR=Nuclear Receptor; NH/NT=NH/NT; AG=Axon Guidance; SLC=SLC Transporter; Fox=Forkhead
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