Photoperiodism

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Photoperiodism: 24-h rhythmic genes

24-h rhythmic genes both in short-day and long-day conditions (Help)

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Probe set ID [asc] P-value FDR Symbol Name Gene Category phase (short day) phase (long day) max. correl. (short day) max. correl. (long day) amplitude (short day) amplitude (long day) rel. amplitude (short day) rel. amplitude (long day)
1 1415680_at [new page][B* page] 0.000369068 0.0274243 Anapc1 anaphase promoting complex subunit 1 6.31666 0.897815 0.675815 77.025 66.7082 0.202858 0.18177 0.000528813
2 1415723_at [new page][B* page] 1.61611e-05 0.00502677 Eif5 eukaryotic translation initiation factor 5 7.89689 0.897321 0.859085 1425.38 1534.92 0.250942 0.22071 0.000539899
3 1415747_s_at [new page][B* page] 0.000519774 0.0330461 Riok3 RIO kinase 3 (yeast) 10.4383 0.759742 0.852173 563.378 402.531 0.206593 0.132264 0.018994
4 1415756_a_at [new page][B* page] 0.000762733 0.0394671 Snapin SNAP-associated protein 8.72411 0.855956 0.725411 749.921 363.84 0.40491 0.196355 0.00222722
5 1415780_a_at [new page][B* page] 1.974e-05 0.00556491 Armcx2 armadillo repeat containing, X-linked 2 7.44891 0.939596 0.74992 665.498 615.649 0.214095 0.201169 6.09743e-05
6 1415796_at [new page][B* page] 0.000969403 0.0446487 Dazap2 DAZ associated protein 2 6.90268 0.830349 0.752374 840.263 716.049 0.206402 0.17119 0.00439791
7 1415806_at [new page][B* page] 2.23732e-05 0.00595422 Plat plasminogen activator, tissue 4.92309 0.870267 0.878955 421.631 636.428 0.316734 0.430527 0.0014401
8 1415839_a_at [new page][B* page] 0.000776035 0.0395995 Npm1 nucleophosmin 1 TF 14.7421 0.546828 0.906928 1092.83 687.59 0.201385 0.128106 0.201751
9 1415860_at [new page][B* page] 0.000636873 0.036456 Kpna2 karyopherin (importin) alpha 2 18.8835 0.725031 0.862973 477.937 418.527 0.297613 0.27772 0.0326988
10 1415904_at [new page][B* page] 0.000638964 0.036456 Lpl lipoprotein lipase EM 8.32498 0.752683 0.848012 381.966 302.309 0.45068 0.439643 0.0213521
11 1416000_a_at [new page][B* page] 7.43704e-05 0.0108929 Prdx1 peroxiredoxin 1 6.95419 0.827957 0.875159 2052.46 753.201 0.3724 0.162896 0.00467617
12 1416053_at [new page][B* page] 9.60954e-08 0.000322535 Lrrn1 leucine rich repeat protein 1, neuronal 7.15797 0.956565 0.911133 474.121 430.111 0.330779 0.271247 1.55207e-05
13 1416056_a_at [new page][B* page] 0.000305304 0.0245161 Ndufb11 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 11 6.75136 0.813959 0.833542 3807.19 1469.96 0.376405 0.178142 0.0065309
14 1416060_at [new page][B* page] 7.14714e-05 0.0106348 Tbc1d15 TBC1 domain family, member 15 12.5541 0.861261 0.847404 228.263 460.976 0.119409 0.227671 0.00192013
15 1416086_at [new page][B* page] 0.000963064 0.0445489 Tpst2 protein-tyrosine sulfotransferase 2 4.28117 0.925037 0.299484 226.021 49.8892 0.381525 0.114808 0.000141904
16 1416101_a_at [new page][B* page] 1.49392e-07 0.000380413 Hist1h1c histone cluster 1, H1c 6.20977 0.926219 0.940348 2412.84 2540.74 0.406403 0.335658 0.000134143
17 1416121_at [new page][B* page] 2.13434e-07 0.000418525 Lox lysyl oxidase EM 5.19652 0.899957 0.949313 114.355 76.4427 0.660732 0.429253 0.000474491
18 1416125_at [new page][B* page] 0.000502537 0.0324361 Fkbp5 FK506 binding protein 5 19.2445 0.741449 0.863276 486.723 531.416 0.519543 0.773814 0.0255482
19 1416135_at [new page][B* page] 3.27725e-05 0.00710611 Apex1 apurinic/apyrimidinic endonuclease 1 TF 9.15178 0.846739 0.887437 654.743 534.215 0.294804 0.240803 0.0028924
20 1416156_at [new page][B* page] 0.000187148 0.0181128 Vcl vinculin CA SP 22.814 0.889274 0.755515 295.881 196.1 0.223132 0.163256 0.000760515
21 1416195_at [new page][B* page] 0.000608948 0.0359162 Inpp5k inositol polyphosphate 5-phosphatase K 11.901 0.813242 0.801843 112.788 134.455 0.143867 0.190935 0.0066207
22 1416288_at [new page][B* page] 0.000153641 0.0161391 Dnaja1 DnaJ (Hsp40) homolog, subfamily A, member 1 20.7344 0.866931 0.80626 1862.86 2228.11 0.376175 0.416417 0.00161859
23 1416303_at [new page][B* page] 8.96305e-06 0.00357958 Litaf LPS-induced TN factor TF 4.6751 0.864101 0.909334 374.288 238.026 0.398899 0.286993 0.00174941
24 1416327_at [new page][B* page] 0.000383181 0.028055 Ufc1 ubiquitin-fold modifier conjugating enzyme 1 7.08406 0.869893 0.747383 758.308 622.139 0.290274 0.229791 0.00145673
25 1416358_at [new page][B* page] 0.00050737 0.0326432 Mfsd10 major facilitator superfamily domain containing 10 9.40391 0.828487 0.794057 153.915 57.2164 0.322189 0.144924 0.00460965
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TF=Transcription Factor; Ch=Channel; GPCR=GPCR; CA=Cell Adhesion; EM=Extracellular Matrix; SP=Structural Protein; Ng=Neurogenesis; Hox=Homeobox; NR=Nuclear Receptor; NH/NT=NH/NT; AG=Axon Guidance; SLC=SLC Transporter; Fox=Forkhead
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