Photoperiodism: 24-h rhythmic genes
24-h rhythmic genes both in short-day and long-day conditions
1 - 25 of 1107 entries
Probe set ID | P-value | FDR | Symbol | Name | Gene Category | phase (short day) | phase (long day) | max. correl. (short day) | max. correl. (long day) | amplitude (short day) | amplitude (long day) | rel. amplitude (short day) | rel. amplitude (long day) | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | 1424415_s_at | 2.81525e-09 | 6.34853e-05 | Spon1 | spondin 1, (f-spondin) extracellular matrix protein | CA EM | 9.31817 | 0.979519 | 0.930553 | 419.998 | 400.924 | 0.552993 | 0.537359 | 1.10862e-06 |
2 | 1425099_a_at | 4.65463e-08 | 0.000245668 | Arntl | aryl hydrocarbon receptor nuclear translocator-like | TF | 3.27354 | 0.983678 | 0.859557 | 514.646 | 549.081 | 0.94154 | 1.10836 | 1.10862e-06 |
3 | 1449065_at | 3.80174e-07 | 0.00065947 | Acot1 | acyl-CoA thioesterase 1 | 3.64686 | 0.981695 | 0.761862 | 148.011 | 144.886 | 0.399569 | 0.411876 | 1.10862e-06 | |
4 | 1426992_at | 1.74533e-07 | 0.000380413 | Xpr1 | xenotropic and polytropic retrovirus receptor 1 | 7.40635 | 0.975168 | 0.833721 | 1864.3 | 803.461 | 0.314684 | 0.161675 | 2.21725e-06 | |
5 | 1459886_at | 1.01651e-06 | 0.00120647 | 11.1821 | 0.976991 | 0.740453 | 137.326 | 88.6269 | 0.456637 | 0.531187 | 2.21725e-06 | |||
6 | 1438953_at | 1.35166e-05 | 0.00482926 | Figf | c-fos induced growth factor | 8.93867 | 0.976421 | 0.426312 | 653.245 | 288.666 | 1.45564 | 0.529256 | 2.21725e-06 | |
7 | 1449528_at | 1.46247e-05 | 0.00499768 | Figf | c-fos induced growth factor | 10.6018 | 0.976751 | 0.407751 | 840.629 | 269.084 | 1.26761 | 0.554548 | 2.21725e-06 | |
8 | 1417602_at | 1.1134e-08 | 0.000145124 | Per2 | period homolog 2 (Drosophila) | TF | 17.1449 | 0.971705 | 0.929008 | 323.916 | 431.892 | 1.11776 | 1.15459 | 4.43449e-06 |
9 | 1445532_at | 1.74123e-07 | 0.000380413 | Myo16 | myosin XVI | 6.08944 | 0.970958 | 0.85937 | 285.876 | 152.512 | 0.603264 | 0.435407 | 4.43449e-06 | |
10 | 1455558_at | 2.45731e-06 | 0.00194433 | Plk1s1 | polo-like kinase 1 substrate 1 | 8.62013 | 0.970671 | 0.724177 | 156.668 | 105.898 | 0.270694 | 0.192997 | 4.43449e-06 | |
11 | 1425558_at | 2.91251e-06 | 0.00218929 | Klc3 | kinesin light chain 3 | 11.2834 | 0.970914 | 0.711099 | 117.934 | 68.7111 | 0.405878 | 0.342529 | 4.43449e-06 | |
12 | 1438954_x_at | 2.25762e-05 | 0.00595422 | Figf | c-fos induced growth factor | 8.20625 | 0.967374 | 0.455033 | 672.61 | 271.455 | 1.40198 | 0.470753 | 4.43449e-06 | |
13 | 1423441_at | 4.25596e-05 | 0.00826035 | Tfb2m | transcription factor B2, mitochondrial | TF | 8.96852 | 0.96699 | 0.277936 | 162.017 | 145.857 | 0.206672 | 0.170312 | 4.43449e-06 |
14 | 1448383_at | 1.51566e-08 | 0.000145124 | Mmp14 | matrix metallopeptidase 14 (membrane-inserted) | CA EM Ng | 4.79969 | 0.964712 | 0.931257 | 482.415 | 448.815 | 0.640055 | 0.619028 | 6.65174e-06 |
15 | 1442590_at | 1.60888e-08 | 0.000145124 | Tnfrsf23 | tumor necrosis factor receptor superfamily, member 23 | 3.86803 | 0.964137 | 0.929273 | 69.8937 | 29.2064 | 0.444601 | 0.232107 | 6.65174e-06 | |
16 | 1416958_at | 4.09474e-07 | 0.000661445 | Nr1d2 | nuclear receptor subfamily 1, group D, member 2 | TF NR | 13.9743 | 0.964089 | 0.841426 | 3697.84 | 3971.74 | 0.807742 | 0.703812 | 6.65174e-06 |
17 | 1454942_at | 2.69157e-07 | 0.000485571 | Fam129a | family with sequence similarity 129, member A | 7.20982 | 0.963863 | 0.862881 | 265.032 | 110.903 | 0.690883 | 0.321987 | 7.76036e-06 | |
18 | 1433398_at | 1.04788e-07 | 0.000322535 | Fgd3 | FYVE, RhoGEF and PH domain containing 3 | 3.85734 | 0.961562 | 0.895681 | 220.316 | 161.464 | 1.24401 | 0.951477 | 8.86898e-06 | |
19 | 1453064_at | 3.4887e-06 | 0.00231388 | Etaa1 | Ewing's tumor-associated antigen 1 | 13.3515 | 0.961955 | 0.745329 | 49.7722 | 32.0834 | 0.330141 | 0.205501 | 8.86898e-06 | |
20 | 1448382_at | 5.68332e-06 | 0.00275616 | Ehhadh | enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A dehydrogenase | 6.6704 | 0.959777 | 0.709668 | 88.0319 | 47.5691 | 0.35303 | 0.235227 | 8.86898e-06 | |
21 | 1456201_at | 6.75132e-05 | 0.010359 | 4632427E13Rik | RIKEN cDNA 4632427E13 gene | 4.4132 | 0.962146 | 0.341499 | 457.652 | 197.91 | 0.383052 | 0.160636 | 8.86898e-06 | |
22 | 1436531_at | 7.47235e-06 | 0.00317934 | Metap2 | methionine aminopeptidase 2 | 10.1964 | 0.958149 | 0.711565 | 216.446 | 212.473 | 0.349749 | 0.283254 | 1.21949e-05 | |
23 | 1420373_at | 0.000158514 | 0.0163223 | Foxj2 | forkhead box J2 | TF Fox | 18.9915 | 0.957455 | 0.156107 | 11.1829 | 9.74885 | 0.218117 | 0.209814 | 1.44121e-05 |
24 | 1416053_at | 9.60954e-08 | 0.000322535 | Lrrn1 | leucine rich repeat protein 1, neuronal | 7.15797 | 0.956565 | 0.911133 | 474.121 | 430.111 | 0.330779 | 0.271247 | 1.55207e-05 | |
25 | 1455385_at | 1.07271e-07 | 0.000322535 | Exoc6 | exocyst complex component 6 | 8.64694 | 0.955631 | 0.908446 | 84.292 | 69.8724 | 0.472778 | 0.446345 | 1.55207e-05 |
TF=Transcription Factor;
Ch=Channel;
GPCR=GPCR;
CA=Cell Adhesion;
EM=Extracellular Matrix;
SP=Structural Protein;
Ng=Neurogenesis;
Hox=Homeobox;
NR=Nuclear Receptor;
NH/NT=NH/NT;
AG=Axon Guidance;
SLC=SLC Transporter;
Fox=Forkhead