Photoperiodism

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Photoperiodism: 24-h rhythmic genes

24-h rhythmic genes both in short-day and long-day conditions (Help)

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Probe set ID P-value FDR Symbol Name Gene Category phase (short day) phase (long day) max. correl. (short day) max. correl. (long day) amplitude (short day) amplitude (long day) rel. amplitude (short day) rel. amplitude (long day) [asc]
1 1424415_s_at [new page][B* page] 2.81525e-09 6.34853e-05 Spon1 spondin 1, (f-spondin) extracellular matrix protein CA EM 9.31817 0.979519 0.930553 419.998 400.924 0.552993 0.537359 1.10862e-06
2 1425099_a_at [new page][B* page] 4.65463e-08 0.000245668 Arntl aryl hydrocarbon receptor nuclear translocator-like TF 3.27354 0.983678 0.859557 514.646 549.081 0.94154 1.10836 1.10862e-06
3 1449065_at [new page][B* page] 3.80174e-07 0.00065947 Acot1 acyl-CoA thioesterase 1 3.64686 0.981695 0.761862 148.011 144.886 0.399569 0.411876 1.10862e-06
4 1426992_at [new page][B* page] 1.74533e-07 0.000380413 Xpr1 xenotropic and polytropic retrovirus receptor 1 7.40635 0.975168 0.833721 1864.3 803.461 0.314684 0.161675 2.21725e-06
5 1459886_at [new page][B* page] 1.01651e-06 0.00120647 11.1821 0.976991 0.740453 137.326 88.6269 0.456637 0.531187 2.21725e-06
6 1438953_at [new page][B* page] 1.35166e-05 0.00482926 Figf c-fos induced growth factor 8.93867 0.976421 0.426312 653.245 288.666 1.45564 0.529256 2.21725e-06
7 1449528_at [new page][B* page] 1.46247e-05 0.00499768 Figf c-fos induced growth factor 10.6018 0.976751 0.407751 840.629 269.084 1.26761 0.554548 2.21725e-06
8 1417602_at [new page][B* page] 1.1134e-08 0.000145124 Per2 period homolog 2 (Drosophila) TF 17.1449 0.971705 0.929008 323.916 431.892 1.11776 1.15459 4.43449e-06
9 1445532_at [new page][B* page] 1.74123e-07 0.000380413 Myo16 myosin XVI 6.08944 0.970958 0.85937 285.876 152.512 0.603264 0.435407 4.43449e-06
10 1455558_at [new page][B* page] 2.45731e-06 0.00194433 Plk1s1 polo-like kinase 1 substrate 1 8.62013 0.970671 0.724177 156.668 105.898 0.270694 0.192997 4.43449e-06
11 1425558_at [new page][B* page] 2.91251e-06 0.00218929 Klc3 kinesin light chain 3 11.2834 0.970914 0.711099 117.934 68.7111 0.405878 0.342529 4.43449e-06
12 1438954_x_at [new page][B* page] 2.25762e-05 0.00595422 Figf c-fos induced growth factor 8.20625 0.967374 0.455033 672.61 271.455 1.40198 0.470753 4.43449e-06
13 1423441_at [new page][B* page] 4.25596e-05 0.00826035 Tfb2m transcription factor B2, mitochondrial TF 8.96852 0.96699 0.277936 162.017 145.857 0.206672 0.170312 4.43449e-06
14 1448383_at [new page][B* page] 1.51566e-08 0.000145124 Mmp14 matrix metallopeptidase 14 (membrane-inserted) CA EM Ng 4.79969 0.964712 0.931257 482.415 448.815 0.640055 0.619028 6.65174e-06
15 1442590_at [new page][B* page] 1.60888e-08 0.000145124 Tnfrsf23 tumor necrosis factor receptor superfamily, member 23 3.86803 0.964137 0.929273 69.8937 29.2064 0.444601 0.232107 6.65174e-06
16 1416958_at [new page][B* page] 4.09474e-07 0.000661445 Nr1d2 nuclear receptor subfamily 1, group D, member 2 TF NR 13.9743 0.964089 0.841426 3697.84 3971.74 0.807742 0.703812 6.65174e-06
17 1454942_at [new page][B* page] 2.69157e-07 0.000485571 Fam129a family with sequence similarity 129, member A 7.20982 0.963863 0.862881 265.032 110.903 0.690883 0.321987 7.76036e-06
18 1433398_at [new page][B* page] 1.04788e-07 0.000322535 Fgd3 FYVE, RhoGEF and PH domain containing 3 3.85734 0.961562 0.895681 220.316 161.464 1.24401 0.951477 8.86898e-06
19 1453064_at [new page][B* page] 3.4887e-06 0.00231388 Etaa1 Ewing's tumor-associated antigen 1 13.3515 0.961955 0.745329 49.7722 32.0834 0.330141 0.205501 8.86898e-06
20 1448382_at [new page][B* page] 5.68332e-06 0.00275616 Ehhadh enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A dehydrogenase 6.6704 0.959777 0.709668 88.0319 47.5691 0.35303 0.235227 8.86898e-06
21 1456201_at [new page][B* page] 6.75132e-05 0.010359 4632427E13Rik RIKEN cDNA 4632427E13 gene 4.4132 0.962146 0.341499 457.652 197.91 0.383052 0.160636 8.86898e-06
22 1436531_at [new page][B* page] 7.47235e-06 0.00317934 Metap2 methionine aminopeptidase 2 10.1964 0.958149 0.711565 216.446 212.473 0.349749 0.283254 1.21949e-05
23 1420373_at [new page][B* page] 0.000158514 0.0163223 Foxj2 forkhead box J2 TF Fox 18.9915 0.957455 0.156107 11.1829 9.74885 0.218117 0.209814 1.44121e-05
24 1416053_at [new page][B* page] 9.60954e-08 0.000322535 Lrrn1 leucine rich repeat protein 1, neuronal 7.15797 0.956565 0.911133 474.121 430.111 0.330779 0.271247 1.55207e-05
25 1455385_at [new page][B* page] 1.07271e-07 0.000322535 Exoc6 exocyst complex component 6 8.64694 0.955631 0.908446 84.292 69.8724 0.472778 0.446345 1.55207e-05
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TF=Transcription Factor; Ch=Channel; GPCR=GPCR; CA=Cell Adhesion; EM=Extracellular Matrix; SP=Structural Protein; Ng=Neurogenesis; Hox=Homeobox; NR=Nuclear Receptor; NH/NT=NH/NT; AG=Axon Guidance; SLC=SLC Transporter; Fox=Forkhead
Copyright © 2010 RIKEN Center for developmental Biology.