Photoperiodism: 24-h rhythmic genes
24-h rhythmic genes both in short-day and long-day conditions
1 - 25 of 1107 entries
Probe set ID | P-value | FDR | Symbol | Name | Gene Category | phase (short day) | phase (long day) | max. correl. (short day) | max. correl. (long day) | amplitude (short day) | amplitude (long day) | rel. amplitude (short day) | rel. amplitude (long day) | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | 1428652_at | 0.000156526 | 0.0162287 | 0610010F05Rik | RIKEN cDNA 0610010F05 gene | 14.0578 | 0.26853 | 0.95339 | 225.866 | 274.204 | 0.180434 | 0.205285 | 0.719216 | |
2 | 1419518_at | 0.000640189 | 0.036456 | Tuba8 | tubulin, alpha 8 | SP | 6.14813 | 0.349777 | 0.930776 | 31.6984 | 96.4354 | 0.207902 | 0.642428 | 0.560786 |
3 | 1435236_at | 0.000470129 | 0.0312005 | Tceanc | transcription elongation factor A (SII) N-terminal and central domain containing | TF | 9.86147 | 0.356443 | 0.935055 | 67.6937 | 74.4731 | 0.347075 | 0.328955 | 0.547429 |
4 | 1442294_at | 0.00107502 | 0.0466197 | A530053G22Rik | RIKEN cDNA A530053G22 gene | 17.5911 | 0.367739 | 0.919792 | 1.94003 | 3.45489 | 0.133605 | 0.249408 | 0.524757 | |
5 | 1430316_at | 2.40968e-05 | 0.00612001 | Ispd | isoprenoid synthase domain containing | 10.5368 | 0.441268 | 0.968442 | 97.7553 | 78.6497 | 0.284342 | 0.221152 | 0.380177 | |
6 | 1436888_at | 0.00053687 | 0.0334076 | Nhlh2 | nescient helix loop helix 2 | TF | 10.7462 | 0.446918 | 0.92648 | 94.6035 | 95.7061 | 0.437358 | 0.362513 | 0.369544 |
7 | 1437351_at | 0.000783122 | 0.0396849 | Cxxc4 | CXXC finger 4 | 8.30293 | 0.461232 | 0.918436 | 252.678 | 251.136 | 0.15571 | 0.152186 | 0.343112 | |
8 | 1455665_at | 0.00106205 | 0.0464331 | Lonrf1 | LON peptidase N-terminal domain and ring finger 1 | 17.4938 | 0.479741 | 0.909017 | 652.759 | 369.89 | 0.78977 | 0.420359 | 0.309962 | |
9 | 1437459_x_at | 0.00104874 | 0.0461906 | Slc25a19 | solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19 | SLC | 12.0818 | 0.508031 | 0.904745 | 2.6028 | 1.86632 | 0.167516 | 0.12781 | 0.261746 |
10 | 1436003_at | 0.00121801 | 0.0497136 | Vcam1 | vascular cell adhesion molecule 1 | CA | 15.3216 | 0.512027 | 0.899873 | 2.97261 | 2.65017 | 0.177035 | 0.152471 | 0.255133 |
11 | 1423130_a_at | 0.000547569 | 0.0335542 | Srsf5 | serine/arginine-rich splicing factor 5 | TF | 7.1194 | 0.52012 | 0.919319 | 2195.73 | 2531.78 | 0.355235 | 0.278349 | 0.242348 |
12 | 1424408_at | 0.000764026 | 0.0394671 | Lims2 | LIM and senescent cell antigen like domains 2 | 2.06176 | 0.538544 | 0.908804 | 242.208 | 165.659 | 0.27995 | 0.232499 | 0.213857 | |
13 | 1415839_a_at | 0.000776035 | 0.0395995 | Npm1 | nucleophosmin 1 | TF | 14.7421 | 0.546828 | 0.906928 | 1092.83 | 687.59 | 0.201385 | 0.128106 | 0.201751 |
14 | 1428303_at | 0.000681545 | 0.037296 | Btbd17 | BTB (POZ) domain containing 17 | 5.01129 | 0.553439 | 0.909367 | 42.019 | 33.0228 | 0.326571 | 0.255294 | 0.192282 | |
15 | 1431058_at | 0.000851144 | 0.0415449 | Htatsf1 | HIV TAT specific factor 1 | TF | 12.331 | 0.556115 | 0.902438 | 13.8087 | 11.8202 | 0.238359 | 0.211341 | 0.188588 |
16 | 1443221_at | 0.000701174 | 0.037737 | 22.2028 | 0.556278 | 0.908099 | 4.42784 | 3.31662 | 0.275062 | 0.219005 | 0.188357 | |||
17 | 1429627_at | 0.000374262 | 0.0276262 | Ppil3 | peptidylprolyl isomerase (cyclophilin)-like 3 | 9.66661 | 0.558565 | 0.921675 | 218.549 | 131.551 | 0.176189 | 0.10311 | 0.185285 | |
18 | 1438995_at | 0.00117305 | 0.048715 | 23.9642 | 0.569124 | 0.892065 | 14.0617 | 16.9457 | 0.253907 | 0.315158 | 0.171087 | |||
19 | 1434261_at | 0.00047219 | 0.031272 | Sipa1l2 | signal-induced proliferation-associated 1 like 2 | 19.4743 | 0.588911 | 0.912439 | 223.138 | 138.071 | 0.357212 | 0.199338 | 0.145852 | |
20 | 1451654_x_at | 0.000667568 | 0.037296 | Zfp825 | zinc finger protein 825 | TF | 12.8274 | 0.595309 | 0.901259 | 38.1334 | 26.4055 | 0.353241 | 0.201368 | 0.138188 |
21 | 1427042_at | 0.000590959 | 0.035254 | Mal2 | mal, T-cell differentiation protein 2 | 10.4319 | 0.595707 | 0.90466 | 110.033 | 79.26 | 0.218991 | 0.189674 | 0.137682 | |
22 | 1433794_at | 0.00117858 | 0.0487216 | Setx | senataxin | 13.4685 | 0.596557 | 0.886184 | 593.808 | 642.53 | 0.209407 | 0.212215 | 0.136653 | |
23 | 1453804_a_at | 0.000113331 | 0.0135894 | Orc4l | origin recognition complex, subunit 4-like (S. cerevisiae) | 18.8797 | 0.599854 | 0.936693 | 102.407 | 124.606 | 0.224446 | 0.277244 | 0.132788 | |
24 | 1456415_at | 0.00116284 | 0.0485603 | Zfp451 | zinc finger protein 451 | TF | 19.8236 | 0.600863 | 0.885503 | 211.182 | 186.597 | 0.341695 | 0.283816 | 0.131568 |
25 | 1434787_at | 0.000576338 | 0.0347506 | Arf3 | ADP-ribosylation factor 3 | 21.5578 | 0.607818 | 0.903081 | 69.946 | 59.5371 | 0.209172 | 0.171268 | 0.123578 |
TF=Transcription Factor;
Ch=Channel;
GPCR=GPCR;
CA=Cell Adhesion;
EM=Extracellular Matrix;
SP=Structural Protein;
Ng=Neurogenesis;
Hox=Homeobox;
NR=Nuclear Receptor;
NH/NT=NH/NT;
AG=Axon Guidance;
SLC=SLC Transporter;
Fox=Forkhead