Photoperiodism: 24-h rhythmic genes
24-h rhythmic genes both in short-day and long-day conditions
1 - 25 of 1107 entries
Probe set ID | P-value | FDR | Symbol | Name | Gene Category | phase (short day) | phase (long day) | max. correl. (short day) | max. correl. (long day) | amplitude (short day) | amplitude (long day) | rel. amplitude (short day) | rel. amplitude (long day) | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | 1438091_a_at | 7.16157e-05 | 0.0106348 | H2afz | H2A histone family, member Z | 9.53224 | 0.903582 | 0.7809 | 893 | 791.751 | 0.316861 | 0.31617 | 0.000419059 | |
2 | 1442294_at | 0.00107502 | 0.0466197 | A530053G22Rik | RIKEN cDNA A530053G22 gene | 17.5911 | 0.367739 | 0.919792 | 1.94003 | 3.45489 | 0.133605 | 0.249408 | 0.524757 | |
3 | 1430630_at | 0.000645642 | 0.0366278 | 9.50872 | 0.923521 | 0.439926 | 10.414 | 4.95263 | 0.391431 | 0.200434 | 0.000157424 | |||
4 | 1420394_s_at | 0.000931195 | 0.0437477 | Gp49a | glycoprotein 49 A | 6.38447 | 0.90502 | 0.526287 | 10.7836 | 11.0885 | 0.269775 | 0.287269 | 0.000388018 | |
5 | 1437135_at | 0.000668487 | 0.037296 | Fbxw10 | F-box and WD-40 domain protein 10 | 9.51485 | 0.653143 | 0.888252 | 10.8238 | 9.5868 | 0.23647 | 0.212169 | 0.0793064 | |
6 | 1434410_at | 0.000360811 | 0.0271668 | Crybg3 | beta-gamma crystallin domain containing 3 | 3.85296 | 0.856454 | 0.774997 | 100.029 | 74.5604 | 0.420496 | 0.359186 | 0.00219175 | |
7 | 1460519_a_at | 0.000129074 | 0.0147137 | Mettl5 | methyltransferase like 5 | 8.28844 | 0.88993 | 0.776956 | 100.763 | 49.2129 | 0.296544 | 0.161299 | 0.000738343 | |
8 | 1438183_x_at | 7.49673e-05 | 0.0108929 | Sord | sorbitol dehydrogenase | 13.5893 | 0.932426 | 0.678747 | 100.894 | 83.5694 | 0.537016 | 0.513883 | 9.64502e-05 | |
9 | 1456981_at | 0.000335925 | 0.0260319 | Tmc7 | transmembrane channel-like gene family 7 | 18.6088 | 0.785507 | 0.852397 | 101.241 | 82.2069 | 0.382747 | 0.286387 | 0.0118612 | |
10 | 1444726_at | 0.000994711 | 0.0452699 | Krr1 | KRR1, small subunit (SSU) processome component, homolog (yeast) | 10.3906 | 0.80436 | 0.784854 | 101.49 | 58.7528 | 0.416373 | 0.266382 | 0.00807632 | |
11 | 1428551_at | 0.00039435 | 0.0283662 | Trmt11 | tRNA methyltransferase 11 homolog (S. cerevisiae) | 9.78174 | 0.822044 | 0.814065 | 101.64 | 120.304 | 0.388004 | 0.462094 | 0.00538015 | |
12 | 1452467_at | 0.000459036 | 0.0308999 | Mmab | methylmalonic aciduria (cobalamin deficiency) type B homolog (human) | 0.178379 | 0.89697 | 0.657991 | 101.978 | 67.5072 | 0.5126 | 0.290952 | 0.000549877 | |
13 | 1438928_x_at | 0.000761115 | 0.0394564 | Ninj1 | ninjurin 1 | CA | 3.48167 | 0.818126 | 0.784256 | 1016.41 | 320.607 | 0.504326 | 0.271103 | 0.00592892 |
14 | 1425891_a_at | 5.69761e-05 | 0.00947431 | Grtp1 | GH regulated TBC protein 1 | 8.51839 | 0.855176 | 0.862096 | 102.267 | 71.1323 | 0.26327 | 0.204739 | 0.00227933 | |
15 | 1451562_at | 0.00106783 | 0.0465113 | A2ld1 | AIG2-like domain 1 | 7.6611 | 0.878318 | 0.635169 | 102.321 | 63.6336 | 0.29416 | 0.166231 | 0.00110308 | |
16 | 1453804_a_at | 0.000113331 | 0.0135894 | Orc4l | origin recognition complex, subunit 4-like (S. cerevisiae) | 18.8797 | 0.599854 | 0.936693 | 102.407 | 124.606 | 0.224446 | 0.277244 | 0.132788 | |
17 | 1418932_at | 1.68572e-05 | 0.00514583 | Nfil3 | nuclear factor, interleukin 3, regulated | TF | 23.9853 | 0.905162 | 0.845913 | 102.522 | 126.137 | 0.701452 | 0.964543 | 0.000388018 |
18 | 1448930_at | 0.000142884 | 0.0155827 | 3010026O09Rik | RIKEN cDNA 3010026O09 gene | 8.82309 | 0.610007 | 0.932499 | 102.676 | 39.991 | 0.543117 | 0.242603 | 0.121166 | |
19 | 1423723_s_at | 4.53703e-05 | 0.00842076 | Tardbp | TAR DNA binding protein | TF | 22.601 | 0.873583 | 0.850656 | 1024.88 | 1302.19 | 0.513481 | 0.499357 | 0.00128379 |
20 | 1447223_at | 2.41538e-05 | 0.00612001 | 10.6467 | 0.922989 | 0.791163 | 103.612 | 100.151 | 0.437825 | 0.4522 | 0.000159642 | |||
21 | 1416756_at | 0.000771939 | 0.0395627 | Dnajb1 | DnaJ (Hsp40) homolog, subfamily B, member 1 | 20.5644 | 0.869756 | 0.693006 | 104.052 | 103.253 | 0.48313 | 0.669979 | 0.0014656 | |
22 | 1445892_at | 0.000639859 | 0.036456 | 17.1114 | 0.863315 | 0.723507 | 104.152 | 79.0262 | 0.570699 | 0.491902 | 0.00178599 | |||
23 | 1422567_at | 5.04086e-05 | 0.00875946 | Fam129a | family with sequence similarity 129, member A | 5.30003 | 0.896242 | 0.814103 | 104.548 | 62.973 | 0.698048 | 0.435238 | 0.000574267 | |
24 | 1434568_at | 0.000725323 | 0.0384856 | 7.53117 | 0.791529 | 0.814004 | 104.758 | 51.913 | 0.337996 | 0.186583 | 0.0105064 | |||
25 | 1437429_at | 0.000140537 | 0.0154999 | Adamtsl1 | ADAMTS-like 1 | EM | 6.14042 | 0.908868 | 0.723195 | 104.936 | 42.4968 | 0.580125 | 0.286151 | 0.00033813 |
TF=Transcription Factor;
Ch=Channel;
GPCR=GPCR;
CA=Cell Adhesion;
EM=Extracellular Matrix;
SP=Structural Protein;
Ng=Neurogenesis;
Hox=Homeobox;
NR=Nuclear Receptor;
NH/NT=NH/NT;
AG=Axon Guidance;
SLC=SLC Transporter;
Fox=Forkhead