Photoperiodism: 24-h rhythmic genes
24-h rhythmic genes both in short-day and long-day conditions
1 - 25 of 1107 entries
Probe set ID | P-value | FDR | Symbol | Name | Gene Category | phase (short day) | phase (long day) | max. correl. (short day) | max. correl. (long day) | amplitude (short day) | amplitude (long day) | rel. amplitude (short day) | rel. amplitude (long day) | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | 1442590_at | 1.60888e-08 | 0.000145124 | Tnfrsf23 | tumor necrosis factor receptor superfamily, member 23 | 3.86803 | 0.964137 | 0.929273 | 69.8937 | 29.2064 | 0.444601 | 0.232107 | 6.65174e-06 | |
2 | 1420481_at | 2.61932e-08 | 0.00019689 | Cnnm3 | cyclin M3 | 4.11399 | 0.94913 | 0.941579 | 185.16 | 135.86 | 0.461107 | 0.394211 | 2.43897e-05 | |
3 | 1447676_x_at | 5.31099e-08 | 0.000245668 | S100a16 | S100 calcium binding protein A16 | 6.4115 | 0.888963 | 0.973571 | 1816.23 | 991.25 | 0.494032 | 0.314649 | 0.000768276 | |
4 | 1425560_a_at | 5.44707e-08 | 0.000245668 | S100a16 | S100 calcium binding protein A16 | 5.86226 | 0.936735 | 0.946323 | 855.01 | 546.144 | 0.399967 | 0.308214 | 6.7626e-05 | |
5 | 1416053_at | 9.60954e-08 | 0.000322535 | Lrrn1 | leucine rich repeat protein 1, neuronal | 7.15797 | 0.956565 | 0.911133 | 474.121 | 430.111 | 0.330779 | 0.271247 | 1.55207e-05 | |
6 | 1433398_at | 1.04788e-07 | 0.000322535 | Fgd3 | FYVE, RhoGEF and PH domain containing 3 | 3.85734 | 0.961562 | 0.895681 | 220.316 | 161.464 | 1.24401 | 0.951477 | 8.86898e-06 | |
7 | 1455385_at | 1.07271e-07 | 0.000322535 | Exoc6 | exocyst complex component 6 | 8.64694 | 0.955631 | 0.908446 | 84.292 | 69.8724 | 0.472778 | 0.446345 | 1.55207e-05 | |
8 | 1416101_a_at | 1.49392e-07 | 0.000380413 | Hist1h1c | histone cluster 1, H1c | 6.20977 | 0.926219 | 0.940348 | 2412.84 | 2540.74 | 0.406403 | 0.335658 | 0.000134143 | |
9 | 1424542_at | 1.52676e-07 | 0.000380413 | S100a4 | S100 calcium binding protein A4 | 8.43146 | 0.949109 | 0.910082 | 41.684 | 34.7298 | 0.624906 | 0.626271 | 2.43897e-05 | |
10 | 1434843_at | 1.70339e-07 | 0.000380413 | Fam179b | family with sequence similarity 179, member B | 16.1861 | 0.805572 | 0.9855 | 819.271 | 753.437 | 0.314536 | 0.215145 | 0.0078557 | |
11 | 1445532_at | 1.74123e-07 | 0.000380413 | Myo16 | myosin XVI | 6.08944 | 0.970958 | 0.85937 | 285.876 | 152.512 | 0.603264 | 0.435407 | 4.43449e-06 | |
12 | 1426992_at | 1.74533e-07 | 0.000380413 | Xpr1 | xenotropic and polytropic retrovirus receptor 1 | 7.40635 | 0.975168 | 0.833721 | 1864.3 | 803.461 | 0.314684 | 0.161675 | 2.21725e-06 | |
13 | 1435141_at | 1.77128e-07 | 0.000380413 | Sft2d2 | SFT2 domain containing 2 | 19.4959 | 0.923138 | 0.940026 | 1177.05 | 948.415 | 0.340089 | 0.279997 | 0.000157424 | |
14 | 1428643_at | 2.68758e-07 | 0.000485571 | Mgat5 | mannoside acetylglucosaminyltransferase 5 | 8.0217 | 0.949116 | 0.896152 | 747.184 | 620.379 | 0.322385 | 0.286609 | 2.43897e-05 | |
15 | 1454942_at | 2.69157e-07 | 0.000485571 | Fam129a | family with sequence similarity 129, member A | 7.20982 | 0.963863 | 0.862881 | 265.032 | 110.903 | 0.690883 | 0.321987 | 7.76036e-06 | |
16 | 1449065_at | 3.80174e-07 | 0.00065947 | Acot1 | acyl-CoA thioesterase 1 | 3.64686 | 0.981695 | 0.761862 | 148.011 | 144.886 | 0.399569 | 0.411876 | 1.10862e-06 | |
17 | 1456161_at | 4.64223e-07 | 0.000673185 | 0610040B10Rik | RIKEN cDNA 0610040B10 gene | 8.86804 | 0.932392 | 0.91515 | 94.2537 | 79.3825 | 0.687726 | 0.62462 | 9.75588e-05 | |
18 | 1451303_at | 4.68266e-07 | 0.000673185 | BC002230 | cDNA sequence BC002230 | 6.28146 | 0.901607 | 0.940327 | 253.279 | 120.427 | 0.40437 | 0.227287 | 0.000447884 | |
19 | 1416721_s_at | 4.92564e-07 | 0.000673185 | Srsf6 | serine/arginine-rich splicing factor 6 | 7.23267 | 0.897096 | 0.941994 | 943.835 | 819.685 | 0.317486 | 0.258366 | 0.00054766 | |
20 | 1424745_at | 5.40669e-07 | 0.000696706 | Agxt2l2 | alanine-glyoxylate aminotransferase 2-like 2 | 10.2339 | 0.933654 | 0.909982 | 99.4882 | 46.0189 | 0.390053 | 0.225062 | 9.20157e-05 | |
21 | 1436893_a_at | 6.09269e-07 | 0.000763295 | March7 | membrane-associated ring finger (C3HC4) 7 | 7.84494 | 0.93636 | 0.899542 | 825.114 | 574.461 | 0.509292 | 0.31478 | 6.87346e-05 | |
22 | 1418892_at | 8.99774e-07 | 0.00109678 | Rhoj | ras homolog gene family, member J | 4.70881 | 0.900312 | 0.930065 | 212.823 | 118.565 | 0.588897 | 0.431457 | 0.000470056 | |
23 | 1459886_at | 1.01651e-06 | 0.00120647 | 11.1821 | 0.976991 | 0.740453 | 137.326 | 88.6269 | 0.456637 | 0.531187 | 2.21725e-06 | |||
24 | 1429169_at | 1.12042e-06 | 0.00129569 | Rbm3 | RNA binding motif protein 3 | 19.0031 | 0.876189 | 0.940789 | 154.642 | 136.011 | 0.994051 | 0.912254 | 0.00117403 | |
25 | 1434570_at | 1.15234e-06 | 0.00129929 | Bend3 | BEN domain containing 3 | 5.95562 | 0.860223 | 0.947381 | 267.703 | 222.669 | 0.452742 | 0.351142 | 0.00197557 |
TF=Transcription Factor;
Ch=Channel;
GPCR=GPCR;
CA=Cell Adhesion;
EM=Extracellular Matrix;
SP=Structural Protein;
Ng=Neurogenesis;
Hox=Homeobox;
NR=Nuclear Receptor;
NH/NT=NH/NT;
AG=Axon Guidance;
SLC=SLC Transporter;
Fox=Forkhead