Photoperiodism: 24-h rhythmic genes
24-h rhythmic genes both in short-day and long-day conditions
876 - 900 of 1107 entries
Probe set ID | P-value | FDR | Symbol | Name | Gene Category | phase (short day) | phase (long day) | max. correl. (short day) | max. correl. (long day) | amplitude (short day) | amplitude (long day) | rel. amplitude (short day) | rel. amplitude (long day) | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
876 | 1416572_at | 6.05244e-08 | 0.000248156 | Mmp14 | matrix metallopeptidase 14 (membrane-inserted) | CA EM Ng | 5.3027 | 0.955202 | 0.921825 | 70.861 | 46.856 | 0.504234 | 0.326825 | 1.66293e-05 |
877 | 1423250_a_at | 6.4411e-05 | 0.010167 | Tgfb2 | transforming growth factor, beta 2 | CA EM Ng NH/NT | 10.1513 | 0.866708 | 0.845634 | 278.529 | 348.927 | 0.640918 | 0.664757 | 0.00163522 |
878 | 1450922_a_at | 0.00027884 | 0.0233754 | Tgfb2 | transforming growth factor, beta 2 | CA EM Ng NH/NT | 11.2269 | 0.843227 | 0.807098 | 129.5 | 197.756 | 0.519859 | 0.559791 | 0.00316068 |
879 | 1426955_at | 7.02317e-05 | 0.0105233 | Col18a1 | collagen, type XVIII, alpha 1 | CA EM SP | 5.35597 | 0.842243 | 0.866161 | 209.467 | 100.805 | 0.383233 | 0.282995 | 0.0032272 |
880 | 1427884_at | 0.000635462 | 0.036456 | Col3a1 | collagen, type III, alpha 1 | CA EM SP | 5.41982 | 0.847996 | 0.753081 | 46.0457 | 31.392 | 0.782818 | 0.576628 | 0.0027904 |
881 | 1427883_a_at | 0.000661686 | 0.0372104 | Col3a1 | collagen, type III, alpha 1 | CA EM SP | 4.85759 | 0.738489 | 0.854693 | 1197.33 | 434.507 | 0.968715 | 0.354469 | 0.0267655 |
882 | 1419703_at | 0.000776168 | 0.0395995 | Col5a3 | collagen, type V, alpha 3 | CA EM SP | 7.09164 | 0.837258 | 0.756466 | 49.5896 | 52.2986 | 0.290543 | 0.338931 | 0.00367841 |
883 | 1437312_at | 0.00106427 | 0.0464331 | Bmpr1b | bone morphogenetic protein receptor, type 1B | CA Ng | 6.12026 | 0.825926 | 0.75277 | 67.4351 | 140.512 | 0.254145 | 0.398982 | 0.0049112 |
884 | 1434709_at | 3.52946e-05 | 0.00736954 | Nrcam | neuron-glia-CAM-related cell adhesion molecule | CA Ng AG | 8.33671 | 0.927741 | 0.754693 | 1048.02 | 479.935 | 0.306877 | 0.169359 | 0.000123057 |
885 | 1457407_at | 0.000146225 | 0.0157426 | Robo1 | roundabout homolog 1 (Drosophila) | CA Ng AG | 0.427864 | 0.941346 | 0.526559 | 22.8236 | 34.3363 | 0.305 | 0.354221 | 5.09967e-05 |
886 | 1416156_at | 0.000187148 | 0.0181128 | Vcl | vinculin | CA SP | 22.814 | 0.889274 | 0.755515 | 295.881 | 196.1 | 0.223132 | 0.163256 | 0.000760515 |
887 | 1455258_at | 9.51416e-06 | 0.00369912 | Kcnc2 | potassium voltage gated channel, Shaw-related subfamily, member 2 | Ch | 18.7558 | 0.664276 | 0.961987 | 365.742 | 314.221 | 0.211125 | 0.186625 | 0.0701603 |
888 | 1439026_at | 1.46566e-05 | 0.00499768 | Trpm3 | transient receptor potential cation channel, subfamily M, member 3 | Ch | 10.4264 | 0.888388 | 0.87407 | 235.965 | 205.58 | 0.53022 | 0.433489 | 0.000784905 |
889 | 1434785_at | 6.30985e-05 | 0.0100204 | Cacng5 | calcium channel, voltage-dependent, gamma subunit 5 | Ch | 6.48508 | 0.888797 | 0.81674 | 733.355 | 393.117 | 0.423998 | 0.228214 | 0.000774927 |
890 | 1424011_at | 7.16832e-05 | 0.0106348 | Aqp9 | aquaporin 9 | Ch | 5.62472 | 0.820613 | 0.882351 | 35.2752 | 37.4534 | 0.495247 | 0.556058 | 0.00559522 |
891 | 1451033_a_at | 0.000158447 | 0.0163223 | Trpc4 | transient receptor potential cation channel, subfamily C, member 4 | Ch | 18.2094 | 0.772251 | 0.88653 | 117.093 | 144.826 | 0.320539 | 0.398094 | 0.0152835 |
892 | 1450754_at | 0.000283206 | 0.0234364 | Cacna2d2 | calcium channel, voltage-dependent, alpha 2/delta subunit 2 | Ch | 8.54906 | 0.869271 | 0.768591 | 666.499 | 1309.1 | 0.250699 | 0.421648 | 0.00149442 |
893 | 1428928_at | 0.000298151 | 0.0244046 | Cacnb4 | calcium channel, voltage-dependent, beta 4 subunit | Ch | 15.7165 | 0.759236 | 0.872176 | 206.897 | 204.438 | 0.256236 | 0.195133 | 0.0191537 |
894 | 1448863_a_at | 0.000536033 | 0.0334076 | Tnfaip1 | tumor necrosis factor, alpha-induced protein 1 (endothelial) | Ch | 8.46038 | 0.872474 | 0.716461 | 590.029 | 356.285 | 0.340213 | 0.225473 | 0.00133256 |
895 | 1423179_at | 0.00105045 | 0.0462209 | Kcnb1 | potassium voltage gated channel, Shab-related subfamily, member 1 | Ch | 4.721 | 0.824003 | 0.756287 | 186.014 | 50.9633 | 0.420629 | 0.174407 | 0.00512627 |
896 | 1426633_s_at | 0.00117582 | 0.048715 | Kctd14 | potassium channel tetramerisation domain containing 14 | Ch | 13.6081 | 0.910486 | 0.446584 | 375.404 | 177.918 | 0.41613 | 0.358184 | 0.000315958 |
897 | 1440177_at | 0.00019167 | 0.0182759 | Grik3 | glutamate receptor, ionotropic, kainate 3 | Ch GPCR NH/NT | 9.96456 | 0.908124 | 0.700712 | 1317.73 | 906.631 | 0.457473 | 0.319322 | 0.000350325 |
898 | 1422187_at | 9.9217e-05 | 0.0125344 | Gabrg3 | gamma-aminobutyric acid (GABA) A receptor, subunit gamma 3 | Ch NH/NT | 6.45563 | 0.879886 | 0.808295 | 8.25969 | 13.2365 | 0.271183 | 0.359083 | 0.00105541 |
899 | 1416121_at | 2.13434e-07 | 0.000418525 | Lox | lysyl oxidase | EM | 5.19652 | 0.899957 | 0.949313 | 114.355 | 76.4427 | 0.660732 | 0.429253 | 0.000474491 |
900 | 1456355_s_at | 1.53236e-05 | 0.00499768 | Srrd | SRR1 domain containing | EM | 7.6109 | 0.881271 | 0.880811 | 216.214 | 65.7016 | 0.440557 | 0.178895 | 0.00101106 |
TF=Transcription Factor;
Ch=Channel;
GPCR=GPCR;
CA=Cell Adhesion;
EM=Extracellular Matrix;
SP=Structural Protein;
Ng=Neurogenesis;
Hox=Homeobox;
NR=Nuclear Receptor;
NH/NT=NH/NT;
AG=Axon Guidance;
SLC=SLC Transporter;
Fox=Forkhead