Photoperiodism

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Photoperiodism: 24-h rhythmic genes

24-h rhythmic genes both in short-day and long-day conditions (Help)

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Probe set ID P-value FDR Symbol Name Gene Category phase (short day) phase (long day) max. correl. (short day) max. correl. (long day) amplitude (short day) [asc] amplitude (long day) rel. amplitude (short day) rel. amplitude (long day)
676 1419325_at [new page][B* page] 0.000157224 0.0162636 Nmu neuromedin U NH/NT 4.86978 0.883267 0.778603 129.391 42.9855 0.730061 0.275157 0.000942329
677 1434235_at [new page][B* page] 6.6328e-06 0.0029328 Slc20a2 solute carrier family 20, member 2 SLC 5.92087 0.873112 0.909659 542.978 421.647 0.420595 0.334268 0.00130263
678 1441445_at [new page][B* page] 1.08534e-05 0.00411345 Per3 period homolog 3 (Drosophila) TF 14.1967 0.940227 0.78217 392.229 423.287 0.809471 0.804001 5.65398e-05
679 1424242_at [new page][B* page] 0.000460156 0.0309292 Bphl biphenyl hydrolase-like (serine hydrolase, breast epithelial mucin-associated antigen) 6.91455 0.898703 0.650714 643.825 425.609 0.252787 0.191825 0.000509967
680 1424211_at [new page][B* page] 0.000838808 0.0412734 Slc25a33 solute carrier family 25, member 33 19.7185 0.653539 0.881045 333.549 426.346 0.247489 0.266658 0.0789517
681 1418744_s_at [new page][B* page] 0.000755724 0.0393579 Tesc tescalcin TF CA 6.95122 0.851673 0.734755 649.568 428.056 0.500592 0.367138 0.0025332
682 1422570_at [new page][B* page] 0.000565105 0.0343734 Yy1 YY1 transcription factor TF 8.17164 0.840256 0.77198 56.8931 43.3616 0.423701 0.307518 0.00339017
683 1426808_at [new page][B* page] 0.000688023 0.0373688 Lgals3 lectin, galactose binding, soluble 3 EM 6.57713 0.869737 0.703119 122.3 43.6262 0.737592 0.36268 0.00146671
684 1440221_at [new page][B* page] 0.000988666 0.0451771 AA408650 expressed sequence AA408650 8.78195 0.76936 0.817665 38.885 43.7434 0.192896 0.190435 0.0160795
685 1425896_a_at [new page][B* page] 0.000650268 0.0367515 Fbn1 fibrillin 1 EM SP 3.96319 0.776056 0.831479 59.7246 43.748 0.440787 0.352508 0.0142336
686 1460001_at [new page][B* page] 0.000729884 0.0386367 Pgpep1 pyroglutamyl-peptidase I 5.23294 0.840981 0.754537 88.3298 43.7543 0.235333 0.133792 0.00333141
687 1435259_s_at [new page][B* page] 0.000687244 0.0373688 Tmem141 transmembrane protein 141 8.56271 0.78891 0.818895 149.585 43.7586 0.479196 0.161503 0.0110995
688 1444029_at [new page][B* page] 0.000236721 0.0210478 Parp11 poly (ADP-ribose) polymerase family, member 11 9.10464 0.857315 0.797532 40.6656 43.8405 0.449544 0.465047 0.00214629
689 1416053_at [new page][B* page] 9.60954e-08 0.000322535 Lrrn1 leucine rich repeat protein 1, neuronal 7.15797 0.956565 0.911133 474.121 430.111 0.330779 0.271247 1.55207e-05
690 1417602_at [new page][B* page] 1.1134e-08 0.000145124 Per2 period homolog 2 (Drosophila) TF 17.1449 0.971705 0.929008 323.916 431.892 1.11776 1.15459 4.43449e-06
691 1452918_at [new page][B* page] 0.000332883 0.025999 D19Ertd737e DNA segment, Chr 19, ERATO Doi 737, expressed 10.1807 0.779575 0.856853 485.788 431.953 0.288396 0.237421 0.0133511
692 1434860_at [new page][B* page] 0.00117707 0.048715 Dpy19l4 dpy-19-like 4 (C. elegans) 13.1057 0.690524 0.855405 198.27 433.428 0.142744 0.262255 0.0516474
693 1427883_a_at [new page][B* page] 0.000661686 0.0372104 Col3a1 collagen, type III, alpha 1 CA EM SP 4.85759 0.738489 0.854693 1197.33 434.507 0.968715 0.354469 0.0267655
694 1437904_at [new page][B* page] 0.000791699 0.0399848 Rbm45 RNA binding motif protein 45 3.60203 0.784264 0.816347 391.911 434.587 0.318164 0.276928 0.0121827
695 1452718_at [new page][B* page] 3.87031e-05 0.00782758 Ubr5 ubiquitin protein ligase E3 component n-recognin 5 7.32097 0.832922 0.892088 400.581 434.81 0.182908 0.174185 0.00411853
696 1434150_a_at [new page][B* page] 0.000405004 0.0288109 Higd1c HIG1 domain family, member 1C 17.3145 0.792639 0.839052 406.769 436.183 0.487445 0.503821 0.0102814
697 1427129_a_at [new page][B* page] 0.00111033 0.047279 Hnrnpr heterogeneous nuclear ribonucleoprotein R 6.25323 0.783296 0.799953 650.84 437.261 0.181527 0.11918 0.0123911
698 1448269_a_at [new page][B* page] 0.00101386 0.0456349 Klhl13 kelch-like 13 (Drosophila) 7.38786 0.870927 0.663676 638.216 438.501 0.247085 0.17677 0.00140463
699 1438115_a_at [new page][B* page] 0.00117734 0.048715 Slc9a3r1 solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1 9.31753 0.810706 0.766995 492.622 438.724 0.386067 0.328687 0.00698765
700 1434276_x_at [new page][B* page] 9.02652e-05 0.0119037 BC004004 cDNA sequence BC004004 5.09716 0.877639 0.815864 89.4505 44.2459 0.324873 0.179191 0.00112193
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TF=Transcription Factor; Ch=Channel; GPCR=GPCR; CA=Cell Adhesion; EM=Extracellular Matrix; SP=Structural Protein; Ng=Neurogenesis; Hox=Homeobox; NR=Nuclear Receptor; NH/NT=NH/NT; AG=Axon Guidance; SLC=SLC Transporter; Fox=Forkhead
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