Photoperiodism

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Photoperiodism: 24-h rhythmic genes

24-h rhythmic genes both in short-day and long-day conditions (Help)

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Probe set ID [asc] P-value FDR Symbol Name Gene Category phase (short day) phase (long day) max. correl. (short day) max. correl. (long day) amplitude (short day) amplitude (long day) rel. amplitude (short day) rel. amplitude (long day)
626 1437190_at [new page][B* page] 0.000411229 0.0290322 Styk1 serine/threonine/tyrosine kinase 1 7.29241 0.796105 0.835857 26.0875 24.1754 0.229232 0.207707 0.00962174
627 1437201_at [new page][B* page] 0.000116987 0.0137761 Lrrc4c leucine rich repeat containing 4C Ng AG 7.71681 0.904193 0.748959 404.517 201.617 0.539197 0.35277 0.00041019
628 1437215_at [new page][B* page] 0.000189597 0.0181936 Nudt15 nudix (nucleoside diphosphate linked moiety X)-type motif 15 6.99136 0.729728 0.898444 56.7528 40.808 0.307238 0.228388 0.0304949
629 1437264_at [new page][B* page] 0.000419406 0.0293721 BC051142 cDNA sequence BC051142 14.5411 0.91924 0.56189 57.2678 52.9541 0.316556 0.334672 0.000207312
630 1437309_a_at [new page][B* page] 8.25081e-05 0.0113353 Rpa1 replication protein A1 13.4605 0.936391 0.637944 739.666 529.403 0.259139 0.222094 6.87346e-05
631 1437312_at [new page][B* page] 0.00106427 0.0464331 Bmpr1b bone morphogenetic protein receptor, type 1B CA Ng 6.12026 0.825926 0.75277 67.4351 140.512 0.254145 0.398982 0.0049112
632 1437334_x_at [new page][B* page] 1.38329e-05 0.00483624 Parn poly(A)-specific ribonuclease (deadenylation nuclease) 8.67845 0.916377 0.835891 320.019 255.041 0.382483 0.287268 0.000243897
633 1437339_s_at [new page][B* page] 4.97842e-05 0.00874178 Pcsk5 proprotein convertase subtilisin/kexin type 5 7.81472 0.92136 0.756652 71.5693 61.3276 0.317341 0.275033 0.000184031
634 1437351_at [new page][B* page] 0.000783122 0.0396849 Cxxc4 CXXC finger 4 8.30293 0.461232 0.918436 252.678 251.136 0.15571 0.152186 0.343112
635 1437429_at [new page][B* page] 0.000140537 0.0154999 Adamtsl1 ADAMTS-like 1 EM 6.14042 0.908868 0.723195 104.936 42.4968 0.580125 0.286151 0.00033813
636 1437449_at [new page][B* page] 0.00116939 0.0486987 Rsad1 radical S-adenosyl methionine domain containing 1 11.9045 0.75306 0.82151 226.83 227.579 0.356813 0.397243 0.0212213
637 1437459_x_at [new page][B* page] 0.00104874 0.0461906 Slc25a19 solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19 SLC 12.0818 0.508031 0.904745 2.6028 1.86632 0.167516 0.12781 0.261746
638 1437492_at [new page][B* page] 0.000307668 0.0245161 Mkx mohawk homeobox TF Hox 17.7711 0.831633 0.815663 45.5659 56.2937 0.545246 0.548001 0.00424824
639 1437506_at [new page][B* page] 0.000303206 0.0245161 Adamts6 a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6 10.2536 0.919435 0.605167 92.1036 56.6075 0.466128 0.276129 0.000207312
640 1437565_a_at [new page][B* page] 2.24447e-05 0.00595422 Gnl2 guanine nucleotide binding protein-like 2 (nucleolar) 12.7438 0.94652 0.700636 173.826 104.11 0.350163 0.251284 3.43673e-05
641 1437623_x_at [new page][B* page] 0.000282684 0.0234362 Xrcc3 X-ray repair complementing defective repair in Chinese hamster cells 3 8.82479 0.837453 0.813148 47.7782 26.8137 0.499119 0.332139 0.00366511
642 1437710_x_at [new page][B* page] 0.000199637 0.0188364 Fam71e1 family with sequence similarity 71, member E1 12.2643 0.918104 0.657834 107.998 79.6866 0.431929 0.419734 0.000220616
643 1437723_s_at [new page][B* page] 1.15527e-05 0.00434199 Derl1 Der1-like domain family, member 1 8.25127 0.88593 0.885283 1834.52 1696.7 0.224827 0.196447 0.000865834
644 1437782_at [new page][B* page] 0.00014777 0.0157848 Cntnap2 contactin associated protein-like 2 CA 11.0396 0.864806 0.810812 253.462 182.516 0.469967 0.347374 0.00171837
645 1437790_at [new page][B* page] 0.000124829 0.0145101 Eml5 echinoderm microtubule associated protein like 5 10.3185 0.918257 0.700252 78.0397 64.9015 0.38126 0.256935 0.000218399
646 1437799_at [new page][B* page] 6.96597e-06 0.00302089 4933407H18Rik RIKEN cDNA 4933407H18 gene 6.78008 0.919211 0.857234 99.9716 54.0177 0.594179 0.361257 0.000207312
647 1437849_x_at [new page][B* page] 0.000997632 0.0453114 Armcx2 armadillo repeat containing, X-linked 2 9.13844 0.841704 0.73138 233.872 274.866 0.167605 0.191648 0.00327265
648 1437857_at [new page][B* page] 0.000493194 0.032237 Dpy19l3 dpy-19-like 3 (C. elegans) 6.57792 0.858964 0.750984 110.044 94.8037 0.308056 0.24899 0.00203765
649 1437904_at [new page][B* page] 0.000791699 0.0399848 Rbm45 RNA binding motif protein 45 3.60203 0.784264 0.816347 391.911 434.587 0.318164 0.276928 0.0121827
650 1437918_at [new page][B* page] 0.000347221 0.0264123 4930539E08Rik RIKEN cDNA 4930539E08 gene 6.32124 0.708206 0.88994 161.125 118.861 0.43447 0.318963 0.0412552
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TF=Transcription Factor; Ch=Channel; GPCR=GPCR; CA=Cell Adhesion; EM=Extracellular Matrix; SP=Structural Protein; Ng=Neurogenesis; Hox=Homeobox; NR=Nuclear Receptor; NH/NT=NH/NT; AG=Axon Guidance; SLC=SLC Transporter; Fox=Forkhead
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