Photoperiodism: 24-h rhythmic genes
24-h rhythmic genes both in short-day and long-day conditions
26 - 50 of 1107 entries
Probe set ID | P-value | FDR | Symbol | Name | Gene Category | phase (short day) | phase (long day) | max. correl. (short day) | max. correl. (long day) | amplitude (short day) | amplitude (long day) | rel. amplitude (short day) | rel. amplitude (long day) | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
26 | 1451342_at | 4.74105e-10 | 2.13826e-05 | Spon1 | spondin 1, (f-spondin) extracellular matrix protein | CA EM | 7.85535 | 0.954424 | 0.981275 | 2395.83 | 1723.7 | 0.538424 | 0.37279 | 1.66293e-05 |
27 | 1416572_at | 6.05244e-08 | 0.000248156 | Mmp14 | matrix metallopeptidase 14 (membrane-inserted) | CA EM Ng | 5.3027 | 0.955202 | 0.921825 | 70.861 | 46.856 | 0.504234 | 0.326825 | 1.66293e-05 |
28 | 1457350_at | 4.88684e-07 | 0.000673185 | Per2 | period homolog 2 (Drosophila) | TF | 17.2433 | 0.954874 | 0.86736 | 161.142 | 164.877 | 0.853574 | 0.956844 | 1.66293e-05 |
29 | 1436458_at | 5.25589e-07 | 0.000696706 | Sema6a | sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A | Ng AG | 7.99719 | 0.955283 | 0.864763 | 204.701 | 143.596 | 0.382712 | 0.3141 | 1.66293e-05 |
30 | 1427172_at | 3.13647e-05 | 0.00690039 | Ofd1 | oral-facial-digital syndrome 1 gene homolog (human) | 9.54123 | 0.952817 | 0.605541 | 97.9287 | 64.7716 | 0.385598 | 0.284991 | 1.7738e-05 | |
31 | 1422078_at | 4.21661e-05 | 0.00826035 | Akt3 | thymoma viral proto-oncogene 3 | 21.334 | 0.953411 | 0.567207 | 12.2027 | 12.039 | 0.221484 | 0.19457 | 1.7738e-05 | |
32 | 1438320_s_at | 0.000106575 | 0.0130615 | Mcm7 | minichromosome maintenance deficient 7 (S. cerevisiae) | TF | 9.89822 | 0.953524 | 0.393133 | 318.48 | 144.305 | 0.332768 | 0.146717 | 1.7738e-05 |
33 | 1432220_at | 8.12426e-05 | 0.0113353 | 4933430L12Rik | RIKEN cDNA 4933430L12 gene | 23.5047 | 0.952364 | 0.467218 | 2.43284 | 3.25627 | 0.148063 | 0.208581 | 1.88466e-05 | |
34 | 1416776_at | 9.96245e-08 | 0.000322535 | Crym | crystallin, mu | TF | 5.70157 | 0.951186 | 0.91725 | 171.649 | 139.591 | 0.504234 | 0.487969 | 2.10638e-05 |
35 | 1426464_at | 4.44775e-07 | 0.000673185 | Nr1d1 | nuclear receptor subfamily 1, group D, member 1 | TF NR | 10.1297 | 0.951303 | 0.877252 | 335.583 | 269.552 | 1.03792 | 1.02136 | 2.10638e-05 |
36 | 1439107_a_at | 0.000136547 | 0.0152815 | Mll5 | myeloid/lymphoid or mixed-lineage leukemia 5 | TF | 12.7512 | 0.951558 | 0.36906 | 188.129 | 96.693 | 0.393969 | 0.205537 | 2.10638e-05 |
37 | 1454960_at | 4.10644e-07 | 0.000661445 | Smad3 | MAD homolog 3 (Drosophila) | TF CA | 6.20816 | 0.95014 | 0.883181 | 256.175 | 252.3 | 0.278491 | 0.249952 | 2.32811e-05 |
38 | 1428343_at | 3.09558e-05 | 0.00686867 | Rcor3 | REST corepressor 3 | TF | 6.72154 | 0.949513 | 0.635657 | 251.712 | 113.321 | 0.483007 | 0.285507 | 2.32811e-05 |
39 | 1425585_at | 0.000100241 | 0.0125645 | Med12 | mediator of RNA polymerase II transcription, subunit 12 homolog (yeast) | TF CA | 15.0419 | 0.949501 | 0.464212 | 193.25 | 68.893 | 0.347402 | 0.148527 | 2.32811e-05 |
40 | 1418698_a_at | 0.000177214 | 0.0175276 | Fech | ferrochelatase | 10.0708 | 0.950042 | 0.316469 | 149.063 | 99.5643 | 0.20839 | 0.151915 | 2.32811e-05 | |
41 | 1420481_at | 2.61932e-08 | 0.00019689 | Cnnm3 | cyclin M3 | 4.11399 | 0.94913 | 0.941579 | 185.16 | 135.86 | 0.461107 | 0.394211 | 2.43897e-05 | |
42 | 1424542_at | 1.52676e-07 | 0.000380413 | S100a4 | S100 calcium binding protein A4 | 8.43146 | 0.949109 | 0.910082 | 41.684 | 34.7298 | 0.624906 | 0.626271 | 2.43897e-05 | |
43 | 1428643_at | 2.68758e-07 | 0.000485571 | Mgat5 | mannoside acetylglucosaminyltransferase 5 | 8.0217 | 0.949116 | 0.896152 | 747.184 | 620.379 | 0.322385 | 0.286609 | 2.43897e-05 | |
44 | 1455064_at | 1.23507e-05 | 0.00456582 | Rab36 | RAB36, member RAS oncogene family | 7.60694 | 0.948073 | 0.736619 | 321.521 | 115.14 | 0.36106 | 0.154831 | 2.99328e-05 | |
45 | 1457182_at | 0.000100291 | 0.0125645 | Map2k7 | mitogen-activated protein kinase kinase 7 | 8.69566 | 0.947783 | 0.513172 | 41.3373 | 15.1826 | 0.74052 | 0.352421 | 3.10414e-05 | |
46 | 1438905_x_at | 0.000214647 | 0.0198252 | C030046I01Rik | RIKEN cDNA C030046I01 gene | 9.41046 | 0.947545 | 0.350219 | 56.7089 | 55.3399 | 0.265108 | 0.230531 | 3.21501e-05 | |
47 | 1436789_at | 8.96859e-06 | 0.00357958 | Ccnjl | cyclin J-like | 2.28789 | 0.946722 | 0.766198 | 74.8233 | 46.7173 | 0.622907 | 0.566401 | 3.43673e-05 | |
48 | 1437565_a_at | 2.24447e-05 | 0.00595422 | Gnl2 | guanine nucleotide binding protein-like 2 (nucleolar) | 12.7438 | 0.94652 | 0.700636 | 173.826 | 104.11 | 0.350163 | 0.251284 | 3.43673e-05 | |
49 | 1428470_at | 6.97351e-05 | 0.0105183 | Exoc2 | exocyst complex component 2 | 9.13442 | 0.946507 | 0.582072 | 281.078 | 168.283 | 0.31274 | 0.208812 | 3.43673e-05 | |
50 | 1438211_s_at | 3.2551e-06 | 0.00222221 | Dbp | D site albumin promoter binding protein | TF | 13.054 | 0.946435 | 0.820706 | 5755.18 | 5120.13 | 1.4694 | 1.33637 | 3.54759e-05 |
TF=Transcription Factor;
Ch=Channel;
GPCR=GPCR;
CA=Cell Adhesion;
EM=Extracellular Matrix;
SP=Structural Protein;
Ng=Neurogenesis;
Hox=Homeobox;
NR=Nuclear Receptor;
NH/NT=NH/NT;
AG=Axon Guidance;
SLC=SLC Transporter;
Fox=Forkhead