Photoperiodism: 24-h rhythmic genes
24-h rhythmic genes both in short-day and long-day conditions
26 - 50 of 1107 entries
Probe set ID | P-value | FDR | Symbol | Name | Gene Category | phase (short day) | phase (long day) | max. correl. (short day) | max. correl. (long day) | amplitude (short day) | amplitude (long day) | rel. amplitude (short day) | rel. amplitude (long day) | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
26 | 1423217_a_at | 0.000226601 | 0.020318 | Fam32a | family with sequence similarity 32, member A | 10.986 | 0.806582 | 0.852231 | 715.459 | 582.248 | 0.166818 | 0.141496 | 0.00766945 | |
27 | 1437459_x_at | 0.00104874 | 0.0461906 | Slc25a19 | solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19 | SLC | 12.0818 | 0.508031 | 0.904745 | 2.6028 | 1.86632 | 0.167516 | 0.12781 | 0.261746 |
28 | 1437849_x_at | 0.000997632 | 0.0453114 | Armcx2 | armadillo repeat containing, X-linked 2 | 9.13844 | 0.841704 | 0.73138 | 233.872 | 274.866 | 0.167605 | 0.191648 | 0.00327265 | |
29 | 1416469_at | 0.000266213 | 0.0226908 | Luzp1 | leucine zipper protein 1 | 21.3126 | 0.841991 | 0.810507 | 78.6554 | 104.595 | 0.169316 | 0.209477 | 0.00324716 | |
30 | 1456134_x_at | 1.54288e-05 | 0.00499768 | Yif1a | Yip1 interacting factor homolog A (S. cerevisiae) | 6.22658 | 0.885483 | 0.875822 | 48.6757 | 65.7561 | 0.170637 | 0.225756 | 0.000878029 | |
31 | 1450649_at | 0.000607581 | 0.0359162 | Gng10 | guanine nucleotide binding protein (G protein), gamma 10 | 9.87877 | 0.855253 | 0.743539 | 796.441 | 560.38 | 0.173671 | 0.11574 | 0.00227822 | |
32 | 1459736_at | 0.000720733 | 0.0383323 | 22.032 | 0.778223 | 0.825256 | 4.88688 | 10.9628 | 0.174016 | 0.38967 | 0.0136682 | |||
33 | 1416824_at | 2.29449e-05 | 0.00595422 | B230118H07Rik | RIKEN cDNA B230118H07 gene | 5.56389 | 0.80031 | 0.921455 | 210.139 | 184.634 | 0.174623 | 0.155191 | 0.00879692 | |
34 | 1419657_a_at | 0.000624226 | 0.0363546 | Slc25a36 | solute carrier family 25, member 36 | 10.9615 | 0.763373 | 0.841965 | 571.792 | 660.13 | 0.1751 | 0.180508 | 0.0178632 | |
35 | 1433563_s_at | 1.95078e-05 | 0.00556491 | Derl1 | Der1-like domain family, member 1 | 8.35836 | 0.801813 | 0.923453 | 487.219 | 491.616 | 0.175557 | 0.174359 | 0.00853418 | |
36 | 1429627_at | 0.000374262 | 0.0276262 | Ppil3 | peptidylprolyl isomerase (cyclophilin)-like 3 | 9.66661 | 0.558565 | 0.921675 | 218.549 | 131.551 | 0.176189 | 0.10311 | 0.185285 | |
37 | 1434184_s_at | 0.000222566 | 0.0201835 | Map4k4 | mitogen-activated protein kinase kinase kinase kinase 4 | 1.67893 | 0.827805 | 0.83433 | 171.916 | 211.96 | 0.17641 | 0.218686 | 0.004705 | |
38 | 1436003_at | 0.00121801 | 0.0497136 | Vcam1 | vascular cell adhesion molecule 1 | CA | 15.3216 | 0.512027 | 0.899873 | 2.97261 | 2.65017 | 0.177035 | 0.152471 | 0.255133 |
39 | 1451935_a_at | 0.000146658 | 0.0157486 | Spint2 | serine protease inhibitor, Kunitz type 2 | EM | 6.18067 | 0.881021 | 0.786395 | 544.146 | 548.8 | 0.177189 | 0.1835 | 0.00101882 |
40 | 1435379_at | 9.52073e-05 | 0.0122346 | Urb2 | URB2 ribosome biogenesis 2 homolog (S. cerevisiae) | 16.6831 | 0.697709 | 0.923208 | 60.7823 | 57.3717 | 0.177637 | 0.170922 | 0.0472129 | |
41 | 1456558_s_at | 1.57931e-05 | 0.00499768 | C87977 | expressed sequence C87977 | 7.84718 | 0.610404 | 0.962328 | 2.88082 | 3.15251 | 0.177829 | 0.20331 | 0.120751 | |
42 | 1434710_at | 0.00109912 | 0.047279 | Dhx29 | DEAH (Asp-Glu-Ala-His) box polypeptide 29 | 23.8363 | 0.74286 | 0.830779 | 74.2247 | 99.5247 | 0.17963 | 0.231486 | 0.0249895 | |
43 | 1424835_at | 0.00044001 | 0.0303432 | Gstm4 | glutathione S-transferase, mu 4 | 6.4252 | 0.75884 | 0.858844 | 95.2797 | 144.021 | 0.179713 | 0.254047 | 0.0192911 | |
44 | 1428652_at | 0.000156526 | 0.0162287 | 0610010F05Rik | RIKEN cDNA 0610010F05 gene | 14.0578 | 0.26853 | 0.95339 | 225.866 | 274.204 | 0.180434 | 0.205285 | 0.719216 | |
45 | 1423160_at | 3.48982e-05 | 0.00736954 | Spred1 | sprouty protein with EVH-1 domain 1, related sequence | 18.8356 | 0.776747 | 0.921625 | 439.703 | 594.337 | 0.181186 | 0.222357 | 0.0140718 | |
46 | 1426453_at | 0.000425876 | 0.0297329 | Pitrm1 | pitrilysin metallepetidase 1 | 5.68282 | 0.926049 | 0.494619 | 143.244 | 97.6184 | 0.181296 | 0.129317 | 0.000134143 | |
47 | 1435675_at | 0.000200458 | 0.0188744 | Tbc1d12 | TBC1D12: TBC1 domain family, member 12 | 11.1833 | 0.930921 | 0.575911 | 112.6 | 80.5698 | 0.181367 | 0.136986 | 0.000103102 | |
48 | 1427129_a_at | 0.00111033 | 0.047279 | Hnrnpr | heterogeneous nuclear ribonucleoprotein R | 6.25323 | 0.783296 | 0.799953 | 650.84 | 437.261 | 0.181527 | 0.11918 | 0.0123911 | |
49 | 1428323_at | 0.000280747 | 0.0234362 | Gpd2 | glycerol phosphate dehydrogenase 2, mitochondrial | 6.15108 | 0.905017 | 0.675009 | 320.55 | 258.513 | 0.181541 | 0.15435 | 0.000388018 | |
50 | 1452718_at | 3.87031e-05 | 0.00782758 | Ubr5 | ubiquitin protein ligase E3 component n-recognin 5 | 7.32097 | 0.832922 | 0.892088 | 400.581 | 434.81 | 0.182908 | 0.174185 | 0.00411853 |
TF=Transcription Factor;
Ch=Channel;
GPCR=GPCR;
CA=Cell Adhesion;
EM=Extracellular Matrix;
SP=Structural Protein;
Ng=Neurogenesis;
Hox=Homeobox;
NR=Nuclear Receptor;
NH/NT=NH/NT;
AG=Axon Guidance;
SLC=SLC Transporter;
Fox=Forkhead