Photoperiodism

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Photoperiodism: 24-h rhythmic genes

24-h rhythmic genes both in short-day and long-day conditions (Help)

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Probe set ID [asc] P-value FDR Symbol Name Gene Category phase (short day) phase (long day) max. correl. (short day) max. correl. (long day) amplitude (short day) amplitude (long day) rel. amplitude (short day) rel. amplitude (long day)
301 1426002_a_at [new page][B* page] 8.19526e-05 0.0113353 Cdc7 cell division cycle 7 (S. cerevisiae) 19.0658 0.837336 0.864761 244.575 170.228 0.340798 0.229272 0.00367176
302 1426100_a_at [new page][B* page] 3.34692e-05 0.00718134 Tk2 thymidine kinase 2, mitochondrial 7.66186 0.771455 0.923844 254.842 56.6585 0.609262 0.190176 0.0154697
303 1426230_at [new page][B* page] 0.0012042 0.0493667 Sphk2 sphingosine kinase 2 TF NH/NT 12.4539 0.653151 0.868749 56.0758 73.4284 0.335999 0.458429 0.079302
304 1426235_a_at [new page][B* page] 0.000411334 0.0290322 Glul glutamate-ammonia ligase (glutamine synthetase) 19.8771 0.707123 0.88568 417.853 640.85 0.423493 0.570793 0.0418317
305 1426243_at [new page][B* page] 3.57427e-05 0.00742872 Cth cystathionase (cystathionine gamma-lyase) 18.7878 0.917592 0.787607 49.3276 74.8612 0.514002 0.660115 0.000226159
306 1426258_at [new page][B* page] 0.000250704 0.0219554 Sorl1 sortilin-related receptor, LDLR class A repeats-containing 6.67411 0.847891 0.80684 932.024 1071.39 0.312004 0.294174 0.00279484
307 1426277_at [new page][B* page] 2.16386e-05 0.00595074 Tmem203 transmembrane protein 203 7.15671 0.747211 0.937939 173.544 98.0097 0.411065 0.289758 0.0233554
308 1426292_at [new page][B* page] 0.0010369 0.0458834 Zfp790 zinc finger protein 790 TF 19.955 0.832077 0.745 53.7284 82.8263 0.214603 0.279381 0.00420944
309 1426452_a_at [new page][B* page] 0.000889084 0.0427035 Rab30 RAB30, member RAS oncogene family 20.4854 0.87789 0.655982 91.6718 115.439 0.403156 0.496355 0.00111527
310 1426453_at [new page][B* page] 0.000425876 0.0297329 Pitrm1 pitrilysin metallepetidase 1 5.68282 0.926049 0.494619 143.244 97.6184 0.181296 0.129317 0.000134143
311 1426455_at [new page][B* page] 0.000692744 0.0375522 Cwc27 CWC27 spliceosome-associated protein homolog (S. cerevisiae) 11.2483 0.870714 0.69965 66.6751 71.5595 0.266942 0.255589 0.0014146
312 1426456_a_at [new page][B* page] 0.000377688 0.0277881 Pias2 protein inhibitor of activated STAT 2 TF 7.12228 0.872386 0.742875 88.4236 68.2602 0.163917 0.11941 0.001337
313 1426464_at [new page][B* page] 4.44775e-07 0.000673185 Nr1d1 nuclear receptor subfamily 1, group D, member 1 TF NR 10.1297 0.951303 0.877252 335.583 269.552 1.03792 1.02136 2.10638e-05
314 1426468_at [new page][B* page] 0.00119513 0.0491801 0610037L13Rik RIKEN cDNA 0610037L13 gene 5.13365 0.824473 0.746774 152.655 141.547 0.22307 0.235147 0.0050653
315 1426527_at [new page][B* page] 0.000490771 0.0321677 Toe1 target of EGR1, member 1 (nuclear) 5.40516 0.824913 0.799708 120.367 57.5446 0.269736 0.136468 0.00500987
316 1426546_at [new page][B* page] 0.000823902 0.0409689 Tesk2 testis-specific kinase 2 CA 8.56016 0.752657 0.837112 72.9151 52.8287 0.343519 0.203725 0.0213609
317 1426581_at [new page][B* page] 0.000184041 0.0179275 Ptpmt1 protein tyrosine phosphatase, mitochondrial 1 7.83897 0.745782 0.894001 377.945 131.728 0.524795 0.23409 0.0238742
318 1426633_s_at [new page][B* page] 0.00117582 0.048715 Kctd14 potassium channel tetramerisation domain containing 14 Ch 13.6081 0.910486 0.446584 375.404 177.918 0.41613 0.358184 0.000315958
319 1426676_s_at [new page][B* page] 0.00110122 0.047279 Tomm70a translocase of outer mitochondrial membrane 70 homolog A (yeast) 11.664 0.831493 0.741567 115.845 113.834 0.274166 0.257022 0.00426598
320 1426698_a_at [new page][B* page] 0.000926154 0.0436929 Hnrnpm heterogeneous nuclear ribonucleoprotein M 21.5668 0.861862 0.696994 970.336 1179.11 0.436497 0.42262 0.00188466
321 1426712_at [new page][B* page] 0.000209906 0.0195196 Slc6a15 solute carrier family 6 (neurotransmitter transporter), member 15 SLC 16.2257 0.795998 0.862806 343.705 355.585 0.386809 0.387488 0.00964391
322 1426727_s_at [new page][B* page] 0.000515497 0.0329739 Ppp1r10 protein phosphatase 1, regulatory subunit 10 4.10412 0.833999 0.78607 601.201 310.105 0.600273 0.45235 0.00400324
323 1426735_at [new page][B* page] 0.00106959 0.0465185 Iars2 isoleucine-tRNA synthetase 2, mitochondrial 10.0529 0.829101 0.747731 165.514 59.2216 0.405205 0.159748 0.00454646
324 1426808_at [new page][B* page] 0.000688023 0.0373688 Lgals3 lectin, galactose binding, soluble 3 EM 6.57713 0.869737 0.703119 122.3 43.6262 0.737592 0.36268 0.00146671
325 1426830_a_at [new page][B* page] 0.000841752 0.0412889 Ahcyl1 S-adenosylhomocysteine hydrolase-like 1 5.883 0.928685 0.271323 609.653 757.103 0.113627 0.151116 0.00011308
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TF=Transcription Factor; Ch=Channel; GPCR=GPCR; CA=Cell Adhesion; EM=Extracellular Matrix; SP=Structural Protein; Ng=Neurogenesis; Hox=Homeobox; NR=Nuclear Receptor; NH/NT=NH/NT; AG=Axon Guidance; SLC=SLC Transporter; Fox=Forkhead
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