Photoperiodism

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Photoperiodism: 24-h rhythmic genes

24-h rhythmic genes both in short-day and long-day conditions (Help)

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Probe set ID P-value FDR [desc] Symbol Name Gene Category phase (short day) phase (long day) max. correl. (short day) max. correl. (long day) amplitude (short day) amplitude (long day) rel. amplitude (short day) rel. amplitude (long day)
1076 1456161_at [new page][B* page] 4.64223e-07 0.000673185 0610040B10Rik RIKEN cDNA 0610040B10 gene 8.86804 0.932392 0.91515 94.2537 79.3825 0.687726 0.62462 9.75588e-05
1077 1451303_at [new page][B* page] 4.68266e-07 0.000673185 BC002230 cDNA sequence BC002230 6.28146 0.901607 0.940327 253.279 120.427 0.40437 0.227287 0.000447884
1078 1457350_at [new page][B* page] 4.88684e-07 0.000673185 Per2 period homolog 2 (Drosophila) TF 17.2433 0.954874 0.86736 161.142 164.877 0.853574 0.956844 1.66293e-05
1079 1416721_s_at [new page][B* page] 4.92564e-07 0.000673185 Srsf6 serine/arginine-rich splicing factor 6 7.23267 0.897096 0.941994 943.835 819.685 0.317486 0.258366 0.00054766
1080 1416958_at [new page][B* page] 4.09474e-07 0.000661445 Nr1d2 nuclear receptor subfamily 1, group D, member 2 TF NR 13.9743 0.964089 0.841426 3697.84 3971.74 0.807742 0.703812 6.65174e-06
1081 1454960_at [new page][B* page] 4.10644e-07 0.000661445 Smad3 MAD homolog 3 (Drosophila) TF CA 6.20816 0.95014 0.883181 256.175 252.3 0.278491 0.249952 2.32811e-05
1082 1449065_at [new page][B* page] 3.80174e-07 0.00065947 Acot1 acyl-CoA thioesterase 1 3.64686 0.981695 0.761862 148.011 144.886 0.399569 0.411876 1.10862e-06
1083 1428643_at [new page][B* page] 2.68758e-07 0.000485571 Mgat5 mannoside acetylglucosaminyltransferase 5 8.0217 0.949116 0.896152 747.184 620.379 0.322385 0.286609 2.43897e-05
1084 1454942_at [new page][B* page] 2.69157e-07 0.000485571 Fam129a family with sequence similarity 129, member A 7.20982 0.963863 0.862881 265.032 110.903 0.690883 0.321987 7.76036e-06
1085 1416121_at [new page][B* page] 2.13434e-07 0.000418525 Lox lysyl oxidase EM 5.19652 0.899957 0.949313 114.355 76.4427 0.660732 0.429253 0.000474491
1086 1435658_at [new page][B* page] 2.00712e-07 0.000411468 Slc27a1 solute carrier family 27 (fatty acid transporter), member 1 SLC 6.95036 0.914881 0.945521 296.181 186.165 0.267997 0.198302 0.000259418
1087 1416101_a_at [new page][B* page] 1.49392e-07 0.000380413 Hist1h1c histone cluster 1, H1c 6.20977 0.926219 0.940348 2412.84 2540.74 0.406403 0.335658 0.000134143
1088 1424542_at [new page][B* page] 1.52676e-07 0.000380413 S100a4 S100 calcium binding protein A4 8.43146 0.949109 0.910082 41.684 34.7298 0.624906 0.626271 2.43897e-05
1089 1434843_at [new page][B* page] 1.70339e-07 0.000380413 Fam179b family with sequence similarity 179, member B 16.1861 0.805572 0.9855 819.271 753.437 0.314536 0.215145 0.0078557
1090 1445532_at [new page][B* page] 1.74123e-07 0.000380413 Myo16 myosin XVI 6.08944 0.970958 0.85937 285.876 152.512 0.603264 0.435407 4.43449e-06
1091 1426992_at [new page][B* page] 1.74533e-07 0.000380413 Xpr1 xenotropic and polytropic retrovirus receptor 1 7.40635 0.975168 0.833721 1864.3 803.461 0.314684 0.161675 2.21725e-06
1092 1435141_at [new page][B* page] 1.77128e-07 0.000380413 Sft2d2 SFT2 domain containing 2 19.4959 0.923138 0.940026 1177.05 948.415 0.340089 0.279997 0.000157424
1093 1416053_at [new page][B* page] 9.60954e-08 0.000322535 Lrrn1 leucine rich repeat protein 1, neuronal 7.15797 0.956565 0.911133 474.121 430.111 0.330779 0.271247 1.55207e-05
1094 1416776_at [new page][B* page] 9.96245e-08 0.000322535 Crym crystallin, mu TF 5.70157 0.951186 0.91725 171.649 139.591 0.504234 0.487969 2.10638e-05
1095 1433398_at [new page][B* page] 1.04788e-07 0.000322535 Fgd3 FYVE, RhoGEF and PH domain containing 3 3.85734 0.961562 0.895681 220.316 161.464 1.24401 0.951477 8.86898e-06
1096 1455385_at [new page][B* page] 1.07271e-07 0.000322535 Exoc6 exocyst complex component 6 8.64694 0.955631 0.908446 84.292 69.8724 0.472778 0.446345 1.55207e-05
1097 1416572_at [new page][B* page] 6.05244e-08 0.000248156 Mmp14 matrix metallopeptidase 14 (membrane-inserted) CA EM Ng 5.3027 0.955202 0.921825 70.861 46.856 0.504234 0.326825 1.66293e-05
1098 1425099_a_at [new page][B* page] 4.65463e-08 0.000245668 Arntl aryl hydrocarbon receptor nuclear translocator-like TF 3.27354 0.983678 0.859557 514.646 549.081 0.94154 1.10836 1.10862e-06
1099 1450779_at [new page][B* page] 5.02851e-08 0.000245668 Fabp7 fatty acid binding protein 7, brain Ng 7.3529 0.922582 0.956773 815.454 962.863 0.694502 0.894705 0.000167402
1100 1447676_x_at [new page][B* page] 5.31099e-08 0.000245668 S100a16 S100 calcium binding protein A16 6.4115 0.888963 0.973571 1816.23 991.25 0.494032 0.314649 0.000768276
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TF=Transcription Factor; Ch=Channel; GPCR=GPCR; CA=Cell Adhesion; EM=Extracellular Matrix; SP=Structural Protein; Ng=Neurogenesis; Hox=Homeobox; NR=Nuclear Receptor; NH/NT=NH/NT; AG=Axon Guidance; SLC=SLC Transporter; Fox=Forkhead
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