Photoperiodism: 24-h rhythmic genes
24-h rhythmic genes both in short-day and long-day conditions
51 - 75 of 1107 entries
Probe set ID | P-value | FDR | Symbol | Name | Gene Category | phase (short day) | phase (long day) | max. correl. (short day) | max. correl. (long day) | amplitude (short day) | amplitude (long day) | rel. amplitude (short day) | rel. amplitude (long day) | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
51 | 1421037_at | 2.89781e-05 | 0.00660072 | Npas2 | neuronal PAS domain protein 2 | TF | 3.90781 | 0.848382 | 0.889713 | 79.9658 | 52.8328 | 1.26381 | 0.90411 | 0.0027638 |
52 | 1428343_at | 3.09558e-05 | 0.00686867 | Rcor3 | REST corepressor 3 | TF | 6.72154 | 0.949513 | 0.635657 | 251.712 | 113.321 | 0.483007 | 0.285507 | 2.32811e-05 |
53 | 1416135_at | 3.27725e-05 | 0.00710611 | Apex1 | apurinic/apyrimidinic endonuclease 1 | TF | 9.15178 | 0.846739 | 0.887437 | 654.743 | 534.215 | 0.294804 | 0.240803 | 0.0028924 |
54 | 1431415_a_at | 3.52658e-05 | 0.00736954 | Tbpl1 | TATA box binding protein-like 1 | TF | 20.0183 | 0.909705 | 0.805604 | 156.899 | 192.258 | 0.247339 | 0.317149 | 0.000323718 |
55 | 1423441_at | 4.25596e-05 | 0.00826035 | Tfb2m | transcription factor B2, mitochondrial | TF | 8.96852 | 0.96699 | 0.277936 | 162.017 | 145.857 | 0.206672 | 0.170312 | 4.43449e-06 |
56 | 1424251_a_at | 4.26755e-05 | 0.00826035 | Hnrpdl | heterogeneous nuclear ribonucleoprotein D-like | TF | 8.47034 | 0.871065 | 0.855933 | 2809.58 | 3358.38 | 0.289304 | 0.29158 | 0.00140019 |
57 | 1423723_s_at | 4.53703e-05 | 0.00842076 | Tardbp | TAR DNA binding protein | TF | 22.601 | 0.873583 | 0.850656 | 1024.88 | 1302.19 | 0.513481 | 0.499357 | 0.00128379 |
58 | 1424175_at | 4.82814e-05 | 0.00857298 | Tef | thyrotroph embryonic factor | TF | 15.0887 | 0.906334 | 0.796375 | 1586.76 | 1355.38 | 0.653908 | 0.537433 | 0.000372497 |
59 | 1460662_at | 4.88856e-05 | 0.00864623 | Per3 | period homolog 3 (Drosophila) | TF | 17.911 | 0.909662 | 0.788634 | 12.7103 | 15.8457 | 0.390698 | 0.409373 | 0.000323718 |
60 | 1455992_at | 5.688e-05 | 0.00947431 | Vgll4 | vestigial like 4 (Drosophila) | TF | 23.7625 | 0.88875 | 0.821333 | 181.779 | 87.0942 | 0.278598 | 0.166921 | 0.000774927 |
61 | 1434637_x_at | 5.71387e-05 | 0.00947431 | Sin3b | transcriptional regulator, SIN3B (yeast) | TF | 11.0369 | 0.908599 | 0.782814 | 880.556 | 452.565 | 0.605399 | 0.360111 | 0.000341456 |
62 | 1452560_a_at | 5.77862e-05 | 0.00954658 | Nfya | nuclear transcription factor-Y alpha | TF | 21.1437 | 0.845381 | 0.870188 | 109.72 | 113.417 | 0.487415 | 0.434664 | 0.00300104 |
63 | 1434284_at | 6.25448e-05 | 0.00997012 | Bdp1 | B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB | TF | 17.8017 | 0.774406 | 0.90981 | 387.656 | 355.318 | 0.267123 | 0.194427 | 0.014666 |
64 | 1417409_at | 6.64729e-05 | 0.010359 | Jun | Jun oncogene | TF | 20.5101 | 0.849718 | 0.861797 | 107.552 | 247.637 | 0.340205 | 0.812654 | 0.00267067 |
65 | 1455959_s_at | 6.94741e-05 | 0.0105146 | Gclc | glutamate-cysteine ligase, catalytic subunit | TF | 6.95629 | 0.933941 | 0.680806 | 624.558 | 381.29 | 0.359198 | 0.256533 | 9.09071e-05 |
66 | 1438427_at | 7.2292e-05 | 0.01069 | Fam120b | family with sequence similarity 120, member B | TF | 9.45634 | 0.898752 | 0.789989 | 133.296 | 94.2716 | 0.499213 | 0.335291 | 0.000509967 |
67 | 1433733_a_at | 7.51138e-05 | 0.0108929 | Cry1 | cryptochrome 1 (photolyase-like) | TF | 22.0826 | 0.860559 | 0.84623 | 205.993 | 157.651 | 1.20166 | 0.960012 | 0.00195894 |
68 | 1450376_at | 7.92605e-05 | 0.0112413 | Mxi1 | Max interacting protein 1 | TF | 15.5533 | 0.872707 | 0.828417 | 391.812 | 310.199 | 0.25254 | 0.211407 | 0.00131926 |
69 | 1451814_a_at | 8.63261e-05 | 0.0115875 | Htatip2 | HIV-1 tat interactive protein 2, homolog (human) | TF | 9.42059 | 0.866135 | 0.833654 | 134.668 | 109.079 | 0.246274 | 0.198259 | 0.00165628 |
70 | 1420772_a_at | 0.000100189 | 0.0125645 | Tsc22d3 | TSC22 domain family, member 3 | TF | 19.2489 | 0.842831 | 0.852606 | 930.569 | 1231.81 | 0.512037 | 0.600429 | 0.00319173 |
71 | 1438320_s_at | 0.000106575 | 0.0130615 | Mcm7 | minichromosome maintenance deficient 7 (S. cerevisiae) | TF | 9.89822 | 0.953524 | 0.393133 | 318.48 | 144.305 | 0.332768 | 0.146717 | 1.7738e-05 |
72 | 1436228_at | 0.000107746 | 0.0131342 | Zranb1 | zinc finger, RAN-binding domain containing 1 | TF | 9.67721 | 0.823637 | 0.866639 | 184.498 | 134.108 | 0.251224 | 0.179432 | 0.00517727 |
73 | 1455039_a_at | 0.000107751 | 0.0131342 | Sin3b | transcriptional regulator, SIN3B (yeast) | TF | 10.8996 | 0.901231 | 0.760535 | 1201 | 798.611 | 0.530662 | 0.44012 | 0.000453427 |
74 | 1430979_a_at | 0.000112403 | 0.0135548 | Prdx2 | peroxiredoxin 2 | TF | 6.57738 | 0.855852 | 0.834253 | 171.064 | 148.686 | 0.334743 | 0.286244 | 0.00223498 |
75 | 1434666_at | 0.00011271 | 0.0135555 | LOC100048247 | similar to polycomb group ring finger 5 | TF | 17.2177 | 0.855541 | 0.834592 | 537.965 | 645.273 | 0.328207 | 0.3194 | 0.00225605 |
TF=Transcription Factor;
Ch=Channel;
GPCR=GPCR;
CA=Cell Adhesion;
EM=Extracellular Matrix;
SP=Structural Protein;
Ng=Neurogenesis;
Hox=Homeobox;
NR=Nuclear Receptor;
NH/NT=NH/NT;
AG=Axon Guidance;
SLC=SLC Transporter;
Fox=Forkhead