Photoperiodism

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Photoperiodism: 24-h rhythmic genes

24-h rhythmic genes both in short-day and long-day conditions (Help)

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Probe set ID P-value FDR Symbol Name Gene Category phase (short day) phase (long day) max. correl. (short day) max. correl. (long day) amplitude (short day) [asc] amplitude (long day) rel. amplitude (short day) rel. amplitude (long day)
776 1438211_s_at [new page][B* page] 3.2551e-06 0.00222221 Dbp D site albumin promoter binding protein TF 13.054 0.946435 0.820706 5755.18 5120.13 1.4694 1.33637 3.54759e-05
777 1418501_a_at [new page][B* page] 0.000264555 0.0226088 Oxr1 oxidation resistance 1 11.4015 0.795362 0.854707 523.157 518.552 0.121856 0.114558 0.00978027
778 1417492_at [new page][B* page] 0.000327608 0.0257861 Ctsb cathepsin B 11.1972 0.839822 0.803069 129.936 52.1736 0.308891 0.132865 0.00344006
779 1419703_at [new page][B* page] 0.000776168 0.0395995 Col5a3 collagen, type V, alpha 3 CA EM SP 7.09164 0.837258 0.756466 49.5896 52.2986 0.290543 0.338931 0.00367841
780 1426546_at [new page][B* page] 0.000823902 0.0409689 Tesk2 testis-specific kinase 2 CA 8.56016 0.752657 0.837112 72.9151 52.8287 0.343519 0.203725 0.0213609
781 1421037_at [new page][B* page] 2.89781e-05 0.00660072 Npas2 neuronal PAS domain protein 2 TF 3.90781 0.848382 0.889713 79.9658 52.8328 1.26381 0.90411 0.0027638
782 1437264_at [new page][B* page] 0.000419406 0.0293721 BC051142 cDNA sequence BC051142 14.5411 0.91924 0.56189 57.2678 52.9541 0.316556 0.334672 0.000207312
783 1417461_at [new page][B* page] 0.000336979 0.0260642 Cap1 CAP, adenylate cyclase-associated protein 1 (yeast) 1.76428 0.904228 0.662189 491.953 522.419 0.199895 0.203238 0.00041019
784 1416609_at [new page][B* page] 0.000131569 0.0149468 BC004004 cDNA sequence BC004004 5.59831 0.842595 0.841591 685.384 526.395 0.292274 0.26693 0.00321279
785 1436908_at [new page][B* page] 0.000171656 0.017186 Pcm1 pericentriolar material 1 9.19574 0.86735 0.799966 544.645 528.917 0.359878 0.346917 0.00159309
786 1437309_a_at [new page][B* page] 8.25081e-05 0.0113353 Rpa1 replication protein A1 13.4605 0.936391 0.637944 739.666 529.403 0.259139 0.222094 6.87346e-05
787 1445940_at [new page][B* page] 0.00075901 0.0393925 D4Ertd298e DNA segment, Chr 4, ERATO Doi 298, expressed 18.8612 0.7985 0.805377 71.7423 53.0943 0.418995 0.327652 0.00912951
788 1436843_at [new page][B* page] 1.66554e-05 0.00514502 C430048L16Rik RIKEN cDNA C430048L16 gene 18.7052 0.881645 0.877312 40.1146 53.256 0.407798 0.438753 0.000997761
789 1436605_at [new page][B* page] 2.2264e-05 0.00595422 Tkt transketolase 8.56315 0.78655 0.926507 57.4114 53.3297 0.325971 0.33597 0.0116394
790 1420427_a_at [new page][B* page] 2.47413e-05 0.00616496 Dhx32 DEAH (Asp-Glu-Ala-His) box polypeptide 32 7.22491 0.777088 0.927602 236.367 53.4515 0.384788 0.122631 0.0139686
791 1425026_at [new page][B* page] 0.000273898 0.0231283 Sft2d2 SFT2 domain containing 2 19.2148 0.659107 0.910462 43.8106 53.5966 0.315895 0.458616 0.0743542
792 1416125_at [new page][B* page] 0.000502537 0.0324361 Fkbp5 FK506 binding protein 5 19.2445 0.741449 0.863276 486.723 531.416 0.519543 0.773814 0.0255482
793 1416135_at [new page][B* page] 3.27725e-05 0.00710611 Apex1 apurinic/apyrimidinic endonuclease 1 TF 9.15178 0.846739 0.887437 654.743 534.215 0.294804 0.240803 0.0028924
794 1452388_at [new page][B* page] 0.000814988 0.0407044 Hspa1a heat shock protein 1A 20.9348 0.803374 0.797022 559.716 538.602 1.01929 1.38141 0.00826257
795 1416700_at [new page][B* page] 0.000617486 0.0362062 Rnd3 Rho family GTPase 3 20.4054 0.869753 0.712089 386.215 539.874 0.487748 0.437729 0.0014656
796 1437799_at [new page][B* page] 6.96597e-06 0.00302089 4933407H18Rik RIKEN cDNA 4933407H18 gene 6.78008 0.919211 0.857234 99.9716 54.0177 0.594179 0.361257 0.000207312
797 1456898_at [new page][B* page] 0.00101258 0.0456227 18.2388 0.679186 0.865696 410.689 544.823 0.256959 0.235493 0.0591883
798 1422848_a_at [new page][B* page] 5.31014e-05 0.00907169 Pabpn1 poly(A) binding protein, nuclear 1 9.07107 0.858861 0.86093 1571.56 545.986 0.44143 0.190576 0.00204208
799 1425560_a_at [new page][B* page] 5.44707e-08 0.000245668 S100a16 S100 calcium binding protein A16 5.86226 0.936735 0.946323 855.01 546.144 0.399967 0.308214 6.7626e-05
800 1430579_at [new page][B* page] 0.000141592 0.0154999 Tnik TRAF2 and NCK interacting kinase 8.36312 0.844436 0.836916 693.165 546.833 0.688104 0.50744 0.00308086
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TF=Transcription Factor; Ch=Channel; GPCR=GPCR; CA=Cell Adhesion; EM=Extracellular Matrix; SP=Structural Protein; Ng=Neurogenesis; Hox=Homeobox; NR=Nuclear Receptor; NH/NT=NH/NT; AG=Axon Guidance; SLC=SLC Transporter; Fox=Forkhead
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