Photoperiodism

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Photoperiodism: 24-h rhythmic genes

24-h rhythmic genes both in short-day and long-day conditions (Help)

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Probe set ID P-value FDR Symbol Name Gene Category phase (short day) phase (long day) max. correl. (short day) max. correl. (long day) amplitude (short day) amplitude (long day) rel. amplitude (short day) [desc] rel. amplitude (long day)
26 1447621_s_at [new page][B* page] 0.00090053 0.0430698 Tmem173 transmembrane protein 173 5.70802 0.703667 0.859867 54.471 172.99 0.461295 0.869747 0.0437496
27 1458176_at [new page][B* page] 9.1288e-06 0.00361156 Per3 period homolog 3 (Drosophila) TF 14.8303 0.93594 0.803388 784.514 748.265 0.962534 0.822345 7.20605e-05
28 1448276_at [new page][B* page] 0.000238321 0.021117 Tspan4 tetraspanin 4 16.1025 0.871265 0.775064 393.493 273.071 1.1317 0.819673 0.00139354
29 1417409_at [new page][B* page] 6.64729e-05 0.010359 Jun Jun oncogene TF 20.5101 0.849718 0.861797 107.552 247.637 0.340205 0.812654 0.00267067
30 1441445_at [new page][B* page] 1.08534e-05 0.00411345 Per3 period homolog 3 (Drosophila) TF 14.1967 0.940227 0.78217 392.229 423.287 0.809471 0.804001 5.65398e-05
31 1416125_at [new page][B* page] 0.000502537 0.0324361 Fkbp5 FK506 binding protein 5 19.2445 0.741449 0.863276 486.723 531.416 0.519543 0.773814 0.0255482
32 1422660_at [new page][B* page] 4.23159e-06 0.00250065 Rbm3 RNA binding motif protein 3 11.3533 0.942968 0.818291 2978.12 3426.56 0.870012 0.769659 4.43449e-05
33 1441938_x_at [new page][B* page] 1.54281e-05 0.00499768 Cables1 CDK5 and Abl enzyme substrate 1 16.1096 0.868833 0.891721 48.9854 48.4567 0.815516 0.753734 0.00151216
34 1452982_at [new page][B* page] 0.000496555 0.0322696 Igf1r insulin-like growth factor I receptor Ng NH/NT 6.27797 0.843368 0.775829 457.252 1003.82 0.373963 0.749184 0.00315736
35 1429363_at [new page][B* page] 7.71173e-05 0.0110576 Vps37a vacuolar protein sorting 37A (yeast) 21.615 0.847963 0.857657 73.0091 74.97 0.757047 0.746785 0.0027904
36 1457296_at [new page][B* page] 3.68881e-05 0.00756222 Cilp cartilage intermediate layer protein, nucleotide pyrophosphohydrolase EM 8.54469 0.86979 0.862715 106.988 95.9117 0.867233 0.737928 0.00146116
37 1419606_a_at [new page][B* page] 0.000798912 0.0401691 Tnnt1 troponin T1, skeletal, slow 4.26952 0.901128 0.571653 67.5977 60.3457 0.786446 0.728232 0.000454535
38 1442570_at [new page][B* page] 0.000558618 0.0341848 20.9061 0.729987 0.865352 94.4159 71.8597 0.818497 0.715921 0.0303585
39 1422477_at [new page][B* page] 5.04969e-05 0.00875946 Cables1 CDK5 and Abl enzyme substrate 1 17.3011 0.895488 0.815386 489.151 468.503 0.720251 0.713812 0.000592005
40 1428052_a_at [new page][B* page] 3.62929e-05 0.00747417 Zmym1 zinc finger, MYM domain containing 1 19.9436 0.831115 0.894695 278.458 274.053 0.61047 0.709819 0.00431254
41 1416958_at [new page][B* page] 4.09474e-07 0.000661445 Nr1d2 nuclear receptor subfamily 1, group D, member 2 TF NR 13.9743 0.964089 0.841426 3697.84 3971.74 0.807742 0.703812 6.65174e-06
42 1421087_at [new page][B* page] 1.7961e-06 0.00168763 Per3 period homolog 3 (Drosophila) TF 15.9716 0.917927 0.90012 788.503 1032.49 0.604854 0.700807 0.000222833
43 1428224_at [new page][B* page] 4.90549e-06 0.00259314 Hnrpdl heterogeneous nuclear ribonucleoprotein D-like TF 10.0739 0.923244 0.860726 465.242 697.995 0.511577 0.699186 0.000157424
44 1452353_at [new page][B* page] 0.000356766 0.0269523 Gpr155 G protein-coupled receptor 155 12.283 0.864329 0.762743 336.562 1401.21 0.326271 0.678718 0.00173832
45 1416756_at [new page][B* page] 0.000771939 0.0395627 Dnajb1 DnaJ (Hsp40) homolog, subfamily B, member 1 20.5644 0.869756 0.693006 104.052 103.253 0.48313 0.669979 0.0014656
46 1423250_a_at [new page][B* page] 6.4411e-05 0.010167 Tgfb2 transforming growth factor, beta 2 CA EM Ng NH/NT 10.1513 0.866708 0.845634 278.529 348.927 0.640918 0.664757 0.00163522
47 1442682_at [new page][B* page] 0.00101151 0.04562 17.0633 0.803858 0.784611 18.4752 22.4864 0.492473 0.661122 0.00818385
48 1426243_at [new page][B* page] 3.57427e-05 0.00742872 Cth cystathionase (cystathionine gamma-lyase) 18.7878 0.917592 0.787607 49.3276 74.8612 0.514002 0.660115 0.000226159
49 1439332_at [new page][B* page] 0.000362978 0.0272692 Ddit4l DNA-damage-inducible transcript 4-like 14.8458 0.852879 0.780657 323.849 201.088 0.888967 0.645235 0.0024423
50 1419070_at [new page][B* page] 0.000224334 0.020195 Cys1 cystin 1 17.8776 0.760149 0.881498 141.16 178.943 0.401751 0.644097 0.0188677
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TF=Transcription Factor; Ch=Channel; GPCR=GPCR; CA=Cell Adhesion; EM=Extracellular Matrix; SP=Structural Protein; Ng=Neurogenesis; Hox=Homeobox; NR=Nuclear Receptor; NH/NT=NH/NT; AG=Axon Guidance; SLC=SLC Transporter; Fox=Forkhead
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