Photoperiodism

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Photoperiodism: 24-h rhythmic genes

24-h rhythmic genes both in short-day and long-day conditions (Help)

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Probe set ID P-value FDR Symbol Name Gene Category phase (short day) phase (long day) max. correl. (short day) max. correl. (long day) [asc] amplitude (short day) amplitude (long day) rel. amplitude (short day) rel. amplitude (long day)
676 1429939_at [new page][B* page] 0.000485263 0.0318571 Ppp6r3 protein phosphatase 6, regulatory subunit 3 19.8594 0.705284 0.880746 40.459 48.8336 0.39002 0.401903 0.0428494
677 1444029_at [new page][B* page] 0.000236721 0.0210478 Parp11 poly (ADP-ribose) polymerase family, member 11 9.10464 0.857315 0.797532 40.6656 43.8405 0.449544 0.465047 0.00214629
678 1432868_at [new page][B* page] 0.00114619 0.048043 Dzip3 DAZ interacting protein 3, zinc finger 8.90207 0.926415 0.192515 40.8365 40.102 0.202037 0.195008 0.000134143
679 1424680_at [new page][B* page] 0.000205076 0.0191891 Fam26e family with sequence similarity 26, member E 4.05956 0.855801 0.806704 40.8998 37.369 0.504805 0.522411 0.00223942
680 1442506_at [new page][B* page] 6.71461e-05 0.010359 9.06487 0.926667 0.712494 40.9381 20.9537 0.685948 0.417669 0.000130817
681 1452718_at [new page][B* page] 3.87031e-05 0.00782758 Ubr5 ubiquitin protein ligase E3 component n-recognin 5 7.32097 0.832922 0.892088 400.581 434.81 0.182908 0.174185 0.00411853
682 1433554_at [new page][B* page] 0.000307481 0.0245161 AU022870 expressed sequence AU022870 9.51651 0.864747 0.771354 401.544 191.749 0.343314 0.193803 0.00172058
683 1424497_at [new page][B* page] 0.00110916 0.047279 Tmem219 transmembrane protein 219 8.88595 0.875876 0.638413 402.856 109.638 0.550871 0.184818 0.00118955
684 1437201_at [new page][B* page] 0.000116987 0.0137761 Lrrc4c leucine rich repeat containing 4C Ng AG 7.71681 0.904193 0.748959 404.517 201.617 0.539197 0.35277 0.00041019
685 1448765_at [new page][B* page] 2.67593e-05 0.00635196 Fyn Fyn proto-oncogene Ng 10.4602 0.92222 0.789124 405.899 326.488 0.350245 0.324066 0.000170728
686 1450020_at [new page][B* page] 0.000570158 0.0345866 Cx3cr1 chemokine (C-X3-C) receptor 1 GPCR 6.42102 0.85987 0.739279 405.973 199.413 0.380356 0.207011 0.00198776
687 1434150_a_at [new page][B* page] 0.000405004 0.0288109 Higd1c HIG1 domain family, member 1C 17.3145 0.792639 0.839052 406.769 436.183 0.487445 0.503821 0.0102814
688 1426994_at [new page][B* page] 0.000626298 0.0363546 Phlpp1 PH domain and leucine rich repeat protein phosphatase 1 3.09764 0.900876 0.605192 407.326 192.984 0.229484 0.124902 0.000460078
689 1446802_at [new page][B* page] 0.000388029 0.0282067 Atox1 ATX1 (antioxidant protein 1) homolog 1 (yeast) 22.3713 0.943315 0.225038 41.1439 24.9982 0.274427 0.178053 4.32363e-05
690 1457182_at [new page][B* page] 0.000100291 0.0125645 Map2k7 mitogen-activated protein kinase kinase 7 8.69566 0.947783 0.513172 41.3373 15.1826 0.74052 0.352421 3.10414e-05
691 1430618_at [new page][B* page] 0.00120381 0.0493667 2610020C07Rik RIKEN cDNA 2610020C07 gene 13.207 0.781993 0.797028 41.3415 22.3036 0.623666 0.36416 0.0127336
692 1456189_x_at [new page][B* page] 0.000401291 0.0286371 Ltbp3 latent transforming growth factor beta binding protein 3 EM 10.4704 0.839345 0.792848 41.4181 33.9353 0.445454 0.415383 0.00348329
693 1424542_at [new page][B* page] 1.52676e-07 0.000380413 S100a4 S100 calcium binding protein A4 8.43146 0.949109 0.910082 41.684 34.7298 0.624906 0.626271 2.43897e-05
694 1458933_at [new page][B* page] 9.4097e-05 0.012195 Slc22a15 solute carrier family 22 (organic anion/cation transporter), member 15 7.57876 0.793232 0.890596 41.7785 17.4292 0.444081 0.179307 0.0101838
695 1445550_at [new page][B* page] 0.000736433 0.038756 Klhl32 kelch-like 32 (Drosophila) 7.44242 0.757455 0.838868 41.8672 55.7184 0.189158 0.242185 0.0197468
696 1452385_at [new page][B* page] 0.000580133 0.0348861 Usp53 ubiquitin specific peptidase 53 16.706 0.787561 0.82787 410.226 418.335 1.06623 0.418796 0.0114122
697 1456898_at [new page][B* page] 0.00101258 0.0456227 18.2388 0.679186 0.865696 410.689 544.823 0.256959 0.235493 0.0591883
698 1436156_at [new page][B* page] 0.00103992 0.0458834 Ccar1 cell division cycle and apoptosis regulator 1 TF 17.5849 0.789991 0.796995 411.645 339.322 0.380914 0.277912 0.0108146
699 1460645_at [new page][B* page] 0.000306066 0.0245161 Chordc1 cysteine and histidine-rich domain (CHORD)-containing, zinc-binding protein 1 20.7412 0.796567 0.8481 4114.25 3758.91 0.942776 0.59538 0.00952972
700 1419033_at [new page][B* page] 8.2475e-05 0.0113353 2610018G03Rik RIKEN cDNA 2610018G03 gene 19.9207 0.82181 0.876213 414.398 380.088 0.379393 0.338858 0.00542338
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TF=Transcription Factor; Ch=Channel; GPCR=GPCR; CA=Cell Adhesion; EM=Extracellular Matrix; SP=Structural Protein; Ng=Neurogenesis; Hox=Homeobox; NR=Nuclear Receptor; NH/NT=NH/NT; AG=Axon Guidance; SLC=SLC Transporter; Fox=Forkhead
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