Photoperiodism

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Photoperiodism: 24-h rhythmic genes

24-h rhythmic genes both in short-day and long-day conditions (Help)

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Probe set ID P-value FDR Symbol Name Gene Category phase (short day) phase (long day) max. correl. (short day) max. correl. (long day) amplitude (short day) [asc] amplitude (long day) rel. amplitude (short day) rel. amplitude (long day)
576 1416567_s_at [new page][B* page] 0.000962614 0.0445489 Atp5e ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit 7.04441 0.739598 0.838459 824.769 349.444 0.495617 0.230261 0.0262832
577 1435216_a_at [new page][B* page] 0.000148045 0.0157848 Odf2 outer dense fiber of sperm tails 2 SP 8.97319 0.798283 0.872922 42.2677 35.0138 0.484294 0.441055 0.00917053
578 1443750_s_at [new page][B* page] 0.00077536 0.0395995 Rpp40 ribonuclease P 40 subunit (human) 7.47324 0.890235 0.629278 61.0656 35.3137 0.361328 0.22905 0.000730582
579 1433455_at [new page][B* page] 0.000271462 0.0229704 LOC100047863 similar to lymphocyte-specific adaptor protein Lnk 13.5154 0.882692 0.744741 86.5499 35.6711 0.367035 0.192871 0.000958959
580 1439786_at [new page][B* page] 0.000474139 0.0313091 Gab2 growth factor receptor bound protein 2-associated protein 2 5.94458 0.849982 0.769077 59.1492 35.9224 0.338648 0.188632 0.00265183
581 1449851_at [new page][B* page] 0.00105847 0.0464331 Per1 period homolog 1 (Drosophila) TF 18.6702 0.894675 0.568947 396.637 355.108 0.622809 0.575102 0.000607525
582 1434284_at [new page][B* page] 6.25448e-05 0.00997012 Bdp1 B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB TF 17.8017 0.774406 0.90981 387.656 355.318 0.267123 0.194427 0.014666
583 1426712_at [new page][B* page] 0.000209906 0.0195196 Slc6a15 solute carrier family 6 (neurotransmitter transporter), member 15 SLC 16.2257 0.795998 0.862806 343.705 355.585 0.386809 0.387488 0.00964391
584 1448863_a_at [new page][B* page] 0.000536033 0.0334076 Tnfaip1 tumor necrosis factor, alpha-induced protein 1 (endothelial) Ch 8.46038 0.872474 0.716461 590.029 356.285 0.340213 0.225473 0.00133256
585 1425142_a_at [new page][B* page] 0.000141471 0.0154999 Hnrnpd heterogeneous nuclear ribonucleoprotein D TF 9.33347 0.885572 0.780869 531.704 356.707 0.43383 0.332768 0.000876921
586 1428447_at [new page][B* page] 0.000683868 0.037296 Tmem14a transmembrane protein 14A 18.6438 0.675892 0.880152 371.094 358.181 0.310293 0.307779 0.0615319
587 1455604_at [new page][B* page] 0.000118283 0.0138563 Fzd5 frizzled homolog 5 (Drosophila) GPCR AG 7.34513 0.856055 0.831705 3138.38 3582.56 0.339435 0.271137 0.00221835
588 1425245_a_at [new page][B* page] 0.00105557 0.0463557 Rgs11 regulator of G-protein signaling 11 16.6171 0.832727 0.742612 138.921 36.1583 0.338393 0.104838 0.00413516
589 1417240_at [new page][B* page] 0.000331039 0.0259656 Zyx zyxin CA 1.76307 0.746828 0.874827 146.787 36.9678 0.421985 0.147867 0.0234917
590 1455589_at [new page][B* page] 0.000531352 0.0333304 1700100M05Rik RIKEN cDNA 1700100M05 gene 8.78362 0.829225 0.790529 316.791 362.499 0.302673 0.334063 0.0045387
591 1418660_at [new page][B* page] 0.000683142 0.037296 Clock circadian locomotor output cycles kaput TF 3.82323 0.869254 0.705242 314.449 362.592 0.317535 0.319715 0.00149553
592 1415756_a_at [new page][B* page] 0.000762733 0.0394671 Snapin SNAP-associated protein 8.72411 0.855956 0.725411 749.921 363.84 0.40491 0.196355 0.00222722
593 1428754_at [new page][B* page] 1.05393e-05 0.00402825 Trmt6 tRNA methyltransferase 6 homolog (S. cerevisiae) 8.80255 0.9131 0.852991 273.693 363.979 0.222308 0.284302 0.000284916
594 1424255_at [new page][B* page] 0.00113928 0.0478867 Supt5h suppressor of Ty 5 homolog (S. cerevisiae) TF 1.95518 0.869585 0.656431 630.604 368.608 0.257196 0.18447 0.00147558
595 1455665_at [new page][B* page] 0.00106205 0.0464331 Lonrf1 LON peptidase N-terminal domain and ring finger 1 17.4938 0.479741 0.909017 652.759 369.89 0.78977 0.420359 0.309962
596 1424680_at [new page][B* page] 0.000205076 0.0191891 Fam26e family with sequence similarity 26, member E 4.05956 0.855801 0.806704 40.8998 37.369 0.504805 0.522411 0.00223942
597 1424011_at [new page][B* page] 7.16832e-05 0.0106348 Aqp9 aquaporin 9 Ch 5.62472 0.820613 0.882351 35.2752 37.4534 0.495247 0.556058 0.00559522
598 1424143_a_at [new page][B* page] 5.37681e-05 0.00915093 Cdt1 chromatin licensing and DNA replication factor 1 9.07629 0.913747 0.774959 86.3161 37.6074 0.603763 0.329839 0.000276047
599 1429275_at [new page][B* page] 0.000563917 0.0343692 6.65331 0.740757 0.859412 46.5828 37.7456 0.394976 0.307538 0.0258198
600 1453632_at [new page][B* page] 9.76662e-05 0.0124783 4930538K18Rik RIKEN cDNA 4930538K18 gene 9.39282 0.799251 0.886377 37.698 37.75 0.401358 0.459772 0.0089743
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TF=Transcription Factor; Ch=Channel; GPCR=GPCR; CA=Cell Adhesion; EM=Extracellular Matrix; SP=Structural Protein; Ng=Neurogenesis; Hox=Homeobox; NR=Nuclear Receptor; NH/NT=NH/NT; AG=Axon Guidance; SLC=SLC Transporter; Fox=Forkhead
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