Photoperiodism

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Photoperiodism: 24-h rhythmic genes

24-h rhythmic genes both in short-day and long-day conditions (Help)

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Probe set ID P-value [asc] FDR Symbol Name Gene Category phase (short day) phase (long day) max. correl. (short day) max. correl. (long day) amplitude (short day) amplitude (long day) rel. amplitude (short day) rel. amplitude (long day)
551 1428928_at [new page][B* page] 0.000298151 0.0244046 Cacnb4 calcium channel, voltage-dependent, beta 4 subunit Ch 15.7165 0.759236 0.872176 206.897 204.438 0.256236 0.195133 0.0191537
552 1423795_at [new page][B* page] 0.000300276 0.0244795 Sfpq splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated) TF 20.0725 0.832079 0.816525 602.11 661.617 0.487576 0.469759 0.00420944
553 1441959_s_at [new page][B* page] 0.000300285 0.0244795 Jkamp JNK1/MAPK8-associated membrane protein 7.70353 0.759659 0.871767 1401.83 924.034 0.25211 0.152196 0.0190218
554 1428335_a_at [new page][B* page] 0.000301044 0.0244795 Scfd1 Sec1 family domain containing 1 6.94505 0.914328 0.631948 220.967 122.078 0.281037 0.169966 0.000264961
555 1429269_at [new page][B* page] 0.000301238 0.0244795 BC068157 cDNA sequence BC068157 6.31314 0.810751 0.836524 636.002 196 0.471386 0.226712 0.00698432
556 1424955_at [new page][B* page] 0.00030259 0.0245161 Haus1 HAUS augmin-like complex, subunit 1 9.04345 0.893661 0.709265 146.661 133.955 0.295213 0.27405 0.00064411
557 1437506_at [new page][B* page] 0.000303206 0.0245161 Adamts6 a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6 10.2536 0.919435 0.605167 92.1036 56.6075 0.466128 0.276129 0.000207312
558 1423566_a_at [new page][B* page] 0.000303321 0.0245161 Hsph1 heat shock 105kDa/110kDa protein 1 22.1621 0.883823 0.734876 1289.03 2053.89 0.819215 0.89841 0.000930135
559 1416056_a_at [new page][B* page] 0.000305304 0.0245161 Ndufb11 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 11 6.75136 0.813959 0.833542 3807.19 1469.96 0.376405 0.178142 0.0065309
560 1453212_at [new page][B* page] 0.000305417 0.0245161 Zfp383 zinc finger protein 383 14.4689 0.802731 0.84316 432.218 699.797 0.310618 0.405448 0.00836789
561 1435841_s_at [new page][B* page] 0.000305471 0.0245161 Suclg2 succinate-Coenzyme A ligase, GDP-forming, beta subunit 9.56109 0.88352 0.734657 433.412 286.712 0.338405 0.243243 0.000934569
562 1460645_at [new page][B* page] 0.000306066 0.0245161 Chordc1 cysteine and histidine-rich domain (CHORD)-containing, zinc-binding protein 1 20.7412 0.796567 0.8481 4114.25 3758.91 0.942776 0.59538 0.00952972
563 1418253_a_at [new page][B* page] 0.000306074 0.0245161 Hspa4l heat shock protein 4 like 21.7564 0.912722 0.638946 376.508 609.532 0.375684 0.513061 0.000289351
564 1451978_at [new page][B* page] 0.000306871 0.0245161 Loxl1 lysyl oxidase-like 1 EM 6.5286 0.868926 0.764148 168.838 92.9 0.512592 0.364459 0.00150884
565 1433554_at [new page][B* page] 0.000307481 0.0245161 AU022870 expressed sequence AU022870 9.51651 0.864747 0.771354 401.544 191.749 0.343314 0.193803 0.00172058
566 1437492_at [new page][B* page] 0.000307668 0.0245161 Mkx mohawk homeobox TF Hox 17.7711 0.831633 0.815663 45.5659 56.2937 0.545246 0.548001 0.00424824
567 1439802_at [new page][B* page] 0.000310819 0.0247235 Stk35 serine/threonine kinase 35 14.6685 0.90283 0.674293 69.602 68.5942 0.32836 0.382116 0.000430146
568 1424311_at [new page][B* page] 0.00031218 0.0247476 Carkd carbohydrate kinase domain containing 6.21543 0.840714 0.804383 811.413 477.501 0.297873 0.184405 0.00335802
569 1452661_at [new page][B* page] 0.000312243 0.0247476 Tfrc transferrin receptor 9.4103 0.698035 0.896221 415.351 499.646 0.289756 0.252328 0.0470355
570 1436871_at [new page][B* page] 0.000312768 0.0247476 Srsf7 serine/arginine-rich splicing factor 7 8.21004 0.82951 0.817456 92.2069 73.8589 0.424324 0.322701 0.00450101
571 1436387_at [new page][B* page] 0.000313998 0.0248014 C330006P03Rik RIKEN cDNA C330006P03 gene 22.1427 0.778634 0.859556 259.909 250.86 1.08159 0.872747 0.0135962
572 1439504_s_at [new page][B* page] 0.000315863 0.0249051 Zfp28 zinc finger protein 28 TF 9.40476 0.910489 0.644277 58.6372 24.8253 0.488222 0.224467 0.000315958
573 1417492_at [new page][B* page] 0.000327608 0.0257861 Ctsb cathepsin B 11.1972 0.839822 0.803069 129.936 52.1736 0.308891 0.132865 0.00344006
574 1453757_at [new page][B* page] 0.00033085 0.0259656 Herc6 hect domain and RLD 6 20.5998 0.8351 0.807919 11.6876 13.8178 0.41527 0.377925 0.00389237
575 1417240_at [new page][B* page] 0.000331039 0.0259656 Zyx zyxin CA 1.76307 0.746828 0.874827 146.787 36.9678 0.421985 0.147867 0.0234917
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TF=Transcription Factor; Ch=Channel; GPCR=GPCR; CA=Cell Adhesion; EM=Extracellular Matrix; SP=Structural Protein; Ng=Neurogenesis; Hox=Homeobox; NR=Nuclear Receptor; NH/NT=NH/NT; AG=Axon Guidance; SLC=SLC Transporter; Fox=Forkhead
Copyright © 2010 RIKEN Center for developmental Biology.