Photoperiodism

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Photoperiodism: 24-h rhythmic genes

24-h rhythmic genes both in short-day and long-day conditions (Help)

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Probe set ID P-value FDR Symbol Name Gene Category phase (short day) [asc] phase (long day) max. correl. (short day) max. correl. (long day) amplitude (short day) amplitude (long day) rel. amplitude (short day) rel. amplitude (long day)
1 1419367_at [new page][B* page] 0.000226149 0.0203179 Decr1 2,4-dienoyl CoA reductase 1, mitochondrial 7.9 0.902015 0.705053 262.468 239.289 0.244216 0.224276 0.000443449
2 1452467_at [new page][B* page] 0.000459036 0.0308999 Mmab methylmalonic aciduria (cobalamin deficiency) type B homolog (human) 0.178379 0.89697 0.657991 101.978 67.5072 0.5126 0.290952 0.000549877
3 1421729_a_at [new page][B* page] 0.000501207 0.0324361 Fert2 fer (fms/fps related) protein kinase, testis specific 2 CA 0.226539 0.798819 0.824748 53.455 59.7532 0.226974 0.238143 0.0090641
4 1428067_at [new page][B* page] 0.000913063 0.0434389 Rasl12 RAS-like, family 12 0.367998 0.902257 0.547173 30.6092 18.3126 0.263042 0.186635 0.000439015
5 1425792_a_at [new page][B* page] 9.84358e-05 0.0124795 Rorc RAR-related orphan receptor gamma TF NR 0.393449 0.781141 0.895444 26.9521 38.1922 0.25284 0.459437 0.0129687
6 1457407_at [new page][B* page] 0.000146225 0.0157426 Robo1 roundabout homolog 1 (Drosophila) CA Ng AG 0.427864 0.941346 0.526559 22.8236 34.3363 0.305 0.354221 5.09967e-05
7 1430546_at [new page][B* page] 0.000101463 0.0126284 Cryzl1 crystallin, zeta (quinone reductase)-like 1 0.505401 0.877853 0.809691 336.299 406.724 0.288762 0.333963 0.00111527
8 1418206_at [new page][B* page] 0.00103625 0.0458834 Sdf2l1 stromal cell-derived factor 2-like 1 1.00146 0.874498 0.650327 154.382 281.932 0.474133 0.58373 0.00124387
9 1448956_at [new page][B* page] 0.000382298 0.0280358 Stard10 START domain containing 10 1.09846 0.803784 0.832778 527.464 206.681 0.426053 0.223598 0.00819494
10 1425550_a_at [new page][B* page] 0.000629599 0.0364046 Prkar1a protein kinase, cAMP dependent regulatory, type I, alpha 1.18111 0.81269 0.80061 504.422 1046.49 0.149058 0.276268 0.00669719
11 1454102_at [new page][B* page] 0.000608163 0.0359162 5031425E22Rik RIKEN cDNA 5031425E22 gene 1.23042 0.903855 0.597694 38.87 39.0511 0.310454 0.359003 0.000416842
12 1460167_at [new page][B* page] 9.5216e-05 0.0122346 Aldh7a1 aldehyde dehydrogenase family 7, member A1 1.41867 0.81602 0.875769 228.901 249.588 0.164077 0.180606 0.00623711
13 1435475_at [new page][B* page] 8.51397e-06 0.0034908 Lman2l lectin, mannose-binding 2-like 1.52512 0.937026 0.803916 695.743 747.56 0.305542 0.343363 6.7626e-05
14 1434813_x_at [new page][B* page] 0.000948281 0.044228 Wars tryptophanyl-tRNA synthetase 1.53573 0.853501 0.713575 238.554 185.061 0.257958 0.256455 0.00240349
15 1434184_s_at [new page][B* page] 0.000222566 0.0201835 Map4k4 mitogen-activated protein kinase kinase kinase kinase 4 1.67893 0.827805 0.83433 171.916 211.96 0.17641 0.218686 0.004705
16 1417240_at [new page][B* page] 0.000331039 0.0259656 Zyx zyxin CA 1.76307 0.746828 0.874827 146.787 36.9678 0.421985 0.147867 0.0234917
17 1417461_at [new page][B* page] 0.000336979 0.0260642 Cap1 CAP, adenylate cyclase-associated protein 1 (yeast) 1.76428 0.904228 0.662189 491.953 522.419 0.199895 0.203238 0.00041019
18 1423650_at [new page][B* page] 0.000930312 0.0437477 Rnf26 ring finger protein 26 1.76913 0.922385 0.362434 74.3914 28.3099 0.300617 0.137551 0.000168511
19 1457740_at [new page][B* page] 0.000563409 0.0343692 Arntl aryl hydrocarbon receptor nuclear translocator-like TF 1.87322 0.773933 0.839119 31.3272 38.2811 0.253128 0.335154 0.014799
20 1443814_x_at [new page][B* page] 0.00120513 0.0493667 Ctsh cathepsin H 1.91975 0.896536 0.539417 128.658 69.6391 0.392556 0.258876 0.000565398
21 1424255_at [new page][B* page] 0.00113928 0.0478867 Supt5h suppressor of Ty 5 homolog (S. cerevisiae) TF 1.95518 0.869585 0.656431 630.604 368.608 0.257196 0.18447 0.00147558
22 1423588_at [new page][B* page] 0.00111003 0.047279 Arpc4 actin related protein 2/3 complex, subunit 4 1.98664 0.78853 0.795193 48.2774 62.5405 0.283911 0.303466 0.011186
23 1428914_at [new page][B* page] 0.000677907 0.037296 2310014D11Rik RIKEN cDNA 2310014D11 gene 1.98922 0.763482 0.838457 246.012 347.517 0.338363 0.468578 0.0178311
24 1423806_at [new page][B* page] 0.000369095 0.0274243 Ints4 integrator complex subunit 4 1.9994 0.925004 0.52833 141.748 80.2584 0.2195 0.150242 0.000141904
25 1417360_at [new page][B* page] 0.0001394 0.0154854 Mlh1 mutL homolog 1 (E. coli) 10.0252 0.746856 0.899772 75.0796 39.832 0.410237 0.226195 0.0234817
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TF=Transcription Factor; Ch=Channel; GPCR=GPCR; CA=Cell Adhesion; EM=Extracellular Matrix; SP=Structural Protein; Ng=Neurogenesis; Hox=Homeobox; NR=Nuclear Receptor; NH/NT=NH/NT; AG=Axon Guidance; SLC=SLC Transporter; Fox=Forkhead
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