Photoperiodism: 24-h rhythmic genes
24-h rhythmic genes both in short-day and long-day conditions
1 - 25 of 1107 entries
Probe set ID | P-value | FDR | Symbol | Name | Gene Category | phase (short day) | phase (long day) | max. correl. (short day) | max. correl. (long day) | amplitude (short day) | amplitude (long day) | rel. amplitude (short day) | rel. amplitude (long day) | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | 1460725_at | 0.0010401 | 0.0458834 | Xpa | xeroderma pigmentosum, complementation group A | 9.55659 | 0.657261 | 0.872159 | 90.9456 | 99.4693 | 0.40618 | 0.408878 | 0.0758409 | |
2 | 1460712_s_at | 0.000247261 | 0.0217807 | Ap1g1 | adaptor protein complex AP-1, gamma 1 subunit | 19.4104 | 0.759372 | 0.878459 | 179.586 | 167.141 | 0.215499 | 0.21192 | 0.0191204 | |
3 | 1460662_at | 4.88856e-05 | 0.00864623 | Per3 | period homolog 3 (Drosophila) | TF | 17.911 | 0.909662 | 0.788634 | 12.7103 | 15.8457 | 0.390698 | 0.409373 | 0.000323718 |
4 | 1460645_at | 0.000306066 | 0.0245161 | Chordc1 | cysteine and histidine-rich domain (CHORD)-containing, zinc-binding protein 1 | 20.7412 | 0.796567 | 0.8481 | 4114.25 | 3758.91 | 0.942776 | 0.59538 | 0.00952972 | |
5 | 1460630_at | 8.20988e-05 | 0.0113353 | Camk2d | calcium/calmodulin-dependent protein kinase II, delta | 6.91024 | 0.912231 | 0.752598 | 86.6373 | 57.3825 | 0.359774 | 0.256865 | 0.000296002 | |
6 | 1460597_at | 0.00107641 | 0.0466321 | Asxl2 | additional sex combs like 2 (Drosophila) | TF | 10.8298 | 0.813831 | 0.768985 | 95.0357 | 109.43 | 0.266987 | 0.273991 | 0.00655085 |
7 | 1460576_at | 0.000437978 | 0.0303432 | Exoc6 | exocyst complex component 6 | 8.13082 | 0.809891 | 0.821047 | 225.693 | 266.336 | 0.22861 | 0.243026 | 0.00710849 | |
8 | 1460565_at | 0.000177216 | 0.0175276 | Slc41a1 | solute carrier family 41, member 1 | SLC | 3.66733 | 0.906818 | 0.711095 | 840.311 | 455.476 | 0.455969 | 0.286641 | 0.000368063 |
9 | 1460519_a_at | 0.000129074 | 0.0147137 | Mettl5 | methyltransferase like 5 | 8.28844 | 0.88993 | 0.776956 | 100.763 | 49.2129 | 0.296544 | 0.161299 | 0.000738343 | |
10 | 1460398_at | 0.000187112 | 0.0181128 | Phf8 | PHD finger protein 8 | 18.2849 | 0.77774 | 0.877557 | 359.763 | 322.924 | 0.376246 | 0.30558 | 0.0137846 | |
11 | 1460361_at | 0.00109505 | 0.0471707 | 5033414D02Rik | RIKEN cDNA 5033414D02 gene | 10.9123 | 0.895245 | 0.561815 | 184.328 | 72.4167 | 0.359488 | 0.173773 | 0.000597548 | |
12 | 1460345_at | 0.000345854 | 0.0264123 | Aida | axin interactor, dorsalization associated | 11.2502 | 0.880491 | 0.732408 | 71.6921 | 45.1585 | 0.27749 | 0.171757 | 0.00103435 | |
13 | 1460342_s_at | 0.000190002 | 0.0181938 | Mprip | myosin phosphatase Rho interacting protein | 5.42582 | 0.92966 | 0.588376 | 826.033 | 381.707 | 0.252319 | 0.139114 | 0.000107536 | |
14 | 1460258_at | 5.50099e-05 | 0.00925748 | Lect1 | leukocyte cell derived chemotaxin 1 | 20.5692 | 0.861257 | 0.857447 | 75.4332 | 82.0876 | 0.369001 | 0.332237 | 0.00192013 | |
15 | 1460243_at | 0.000673289 | 0.037296 | Sptlc2 | serine palmitoyltransferase, long chain base subunit 2 | 8.90592 | 0.880823 | 0.675901 | 178.179 | 192.159 | 0.319801 | 0.316194 | 0.00102548 | |
16 | 1460240_a_at | 2.2723e-05 | 0.00595422 | Hnrnpc | heterogeneous nuclear ribonucleoprotein C | 23.6973 | 0.934174 | 0.764172 | 2166.73 | 3048.16 | 0.281914 | 0.366018 | 8.97985e-05 | |
17 | 1460199_a_at | 0.000111721 | 0.0135087 | Pafah1b1 | platelet-activating factor acetylhydrolase, isoform 1b, subunit 1 | Ng | 21.2294 | 0.943054 | 0.548497 | 226.544 | 239.283 | 0.257862 | 0.257968 | 4.43449e-05 |
18 | 1460171_at | 0.000463346 | 0.0310511 | Cops5 | COP9 (constitutive photomorphogenic) homolog, subunit 5 (Arabidopsis thaliana) | TF | 9.71972 | 0.882148 | 0.70569 | 724.25 | 296.564 | 0.374585 | 0.147344 | 0.000981131 |
19 | 1460167_at | 9.5216e-05 | 0.0122346 | Aldh7a1 | aldehyde dehydrogenase family 7, member A1 | 1.41867 | 0.81602 | 0.875769 | 228.901 | 249.588 | 0.164077 | 0.180606 | 0.00623711 | |
20 | 1460061_at | 0.000127613 | 0.0147027 | 6.09985 | 0.794522 | 0.880661 | 117.439 | 146.088 | 0.293182 | 0.363188 | 0.00992994 | |||
21 | 1460053_at | 0.000651912 | 0.0367983 | Smyd4 | SET and MYND domain containing 4 | 10.3559 | 0.844165 | 0.757694 | 147.015 | 82.1522 | 0.406833 | 0.29552 | 0.00309638 | |
22 | 1460009_at | 0.000671111 | 0.037296 | Ier5 | immediate early response 5 | 7.55815 | 0.870161 | 0.703976 | 45.1858 | 25.1131 | 0.535666 | 0.351948 | 0.00144343 | |
23 | 1460001_at | 0.000729884 | 0.0386367 | Pgpep1 | pyroglutamyl-peptidase I | 5.23294 | 0.840981 | 0.754537 | 88.3298 | 43.7543 | 0.235333 | 0.133792 | 0.00333141 | |
24 | 1459994_x_at | 0.000373643 | 0.0276262 | Trfr2 | transferrin receptor 2 | 8.82703 | 0.752236 | 0.86834 | 130.181 | 71.5994 | 0.654267 | 0.38652 | 0.021515 | |
25 | 1459897_a_at | 4.0521e-05 | 0.00804958 | Sbsn | suprabasin | 9.07619 | 0.908859 | 0.800727 | 191.749 | 105.708 | 0.458288 | 0.265155 | 0.00033813 |
TF=Transcription Factor;
Ch=Channel;
GPCR=GPCR;
CA=Cell Adhesion;
EM=Extracellular Matrix;
SP=Structural Protein;
Ng=Neurogenesis;
Hox=Homeobox;
NR=Nuclear Receptor;
NH/NT=NH/NT;
AG=Axon Guidance;
SLC=SLC Transporter;
Fox=Forkhead