Photoperiodism

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Photoperiodism: 24-h rhythmic genes

24-h rhythmic genes both in short-day and long-day conditions (Help)

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Probe set ID P-value FDR Symbol Name Gene Category phase (short day) phase (long day) max. correl. (short day) [desc] max. correl. (long day) amplitude (short day) amplitude (long day) rel. amplitude (short day) rel. amplitude (long day)
1 1434843_at [new page][B* page] 1.70339e-07 0.000380413 Fam179b family with sequence similarity 179, member B 16.1861 0.805572 0.9855 819.271 753.437 0.314536 0.215145 0.0078557
2 1451342_at [new page][B* page] 4.74105e-10 2.13826e-05 Spon1 spondin 1, (f-spondin) extracellular matrix protein CA EM 7.85535 0.954424 0.981275 2395.83 1723.7 0.538424 0.37279 1.66293e-05
3 1447676_x_at [new page][B* page] 5.31099e-08 0.000245668 S100a16 S100 calcium binding protein A16 6.4115 0.888963 0.973571 1816.23 991.25 0.494032 0.314649 0.000768276
4 1430316_at [new page][B* page] 2.40968e-05 0.00612001 Ispd isoprenoid synthase domain containing 10.5368 0.441268 0.968442 97.7553 78.6497 0.284342 0.221152 0.380177
5 1456558_s_at [new page][B* page] 1.57931e-05 0.00499768 C87977 expressed sequence C87977 7.84718 0.610404 0.962328 2.88082 3.15251 0.177829 0.20331 0.120751
6 1455258_at [new page][B* page] 9.51416e-06 0.00369912 Kcnc2 potassium voltage gated channel, Shaw-related subfamily, member 2 Ch 18.7558 0.664276 0.961987 365.742 314.221 0.211125 0.186625 0.0701603
7 1438201_at [new page][B* page] 8.91612e-06 0.00357958 Pdp1 pyruvate dehyrogenase phosphatase catalytic subunit 1 20.2096 0.697035 0.958205 194.317 159.01 0.373259 0.258377 0.047602
8 1450779_at [new page][B* page] 5.02851e-08 0.000245668 Fabp7 fatty acid binding protein 7, brain Ng 7.3529 0.922582 0.956773 815.454 962.863 0.694502 0.894705 0.000167402
9 1438075_at [new page][B* page] 6.45939e-06 0.00288441 Fem1c fem-1 homolog c (C.elegans) 7.48382 0.739135 0.956153 110.844 102.534 0.324229 0.283029 0.0265016
10 1419522_at [new page][B* page] 5.48434e-06 0.00272014 Zmynd19 zinc finger, MYND domain containing 19 22.0634 0.754366 0.95498 45.4053 49.1204 0.238351 0.287983 0.02077
11 1428652_at [new page][B* page] 0.000156526 0.0162287 0610010F05Rik RIKEN cDNA 0610010F05 gene 14.0578 0.26853 0.95339 225.866 274.204 0.180434 0.205285 0.719216
12 1458273_at [new page][B* page] 2.84975e-05 0.00655747 Hnrnpd heterogeneous nuclear ribonucleoprotein D TF 11.9949 0.644455 0.949696 62.4403 55.4643 0.286936 0.234287 0.0867342
13 1429440_at [new page][B* page] 1.41572e-06 0.00148489 1810041L15Rik RIKEN cDNA 1810041L15 gene 3.19643 0.838987 0.949637 224.222 124.116 0.268711 0.168278 0.00351101
14 1416121_at [new page][B* page] 2.13434e-07 0.000418525 Lox lysyl oxidase EM 5.19652 0.899957 0.949313 114.355 76.4427 0.660732 0.429253 0.000474491
15 1434570_at [new page][B* page] 1.15234e-06 0.00129929 Bend3 BEN domain containing 3 5.95562 0.860223 0.947381 267.703 222.669 0.452742 0.351142 0.00197557
16 1425560_a_at [new page][B* page] 5.44707e-08 0.000245668 S100a16 S100 calcium binding protein A16 5.86226 0.936735 0.946323 855.01 546.144 0.399967 0.308214 6.7626e-05
17 1435658_at [new page][B* page] 2.00712e-07 0.000411468 Slc27a1 solute carrier family 27 (fatty acid transporter), member 1 SLC 6.95036 0.914881 0.945521 296.181 186.165 0.267997 0.198302 0.000259418
18 1455419_at [new page][B* page] 4.06596e-06 0.00247809 D630045J12Rik RIKEN cDNA D630045J12 gene 6.81804 0.81688 0.944776 73.514 71.8633 0.256489 0.260713 0.0061196
19 1416721_s_at [new page][B* page] 4.92564e-07 0.000673185 Srsf6 serine/arginine-rich splicing factor 6 7.23267 0.897096 0.941994 943.835 819.685 0.317486 0.258366 0.00054766
20 1420481_at [new page][B* page] 2.61932e-08 0.00019689 Cnnm3 cyclin M3 4.11399 0.94913 0.941579 185.16 135.86 0.461107 0.394211 2.43897e-05
21 1417430_at [new page][B* page] 1.50069e-05 0.00499768 Cdr2 cerebellar degeneration-related 2 21.6258 0.760802 0.940912 167.28 211.854 0.401399 0.443854 0.0186637
22 1429169_at [new page][B* page] 1.12042e-06 0.00129569 Rbm3 RNA binding motif protein 3 19.0031 0.876189 0.940789 154.642 136.011 0.994051 0.912254 0.00117403
23 1416101_a_at [new page][B* page] 1.49392e-07 0.000380413 Hist1h1c histone cluster 1, H1c 6.20977 0.926219 0.940348 2412.84 2540.74 0.406403 0.335658 0.000134143
24 1451303_at [new page][B* page] 4.68266e-07 0.000673185 BC002230 cDNA sequence BC002230 6.28146 0.901607 0.940327 253.279 120.427 0.40437 0.227287 0.000447884
25 1435141_at [new page][B* page] 1.77128e-07 0.000380413 Sft2d2 SFT2 domain containing 2 19.4959 0.923138 0.940026 1177.05 948.415 0.340089 0.279997 0.000157424
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TF=Transcription Factor; Ch=Channel; GPCR=GPCR; CA=Cell Adhesion; EM=Extracellular Matrix; SP=Structural Protein; Ng=Neurogenesis; Hox=Homeobox; NR=Nuclear Receptor; NH/NT=NH/NT; AG=Axon Guidance; SLC=SLC Transporter; Fox=Forkhead
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