Photoperiodism: 24-h rhythmic genes
24-h rhythmic genes both in short-day and long-day conditions
1 - 25 of 1107 entries
Probe set ID | P-value | FDR | Symbol | Name | Gene Category | phase (short day) | phase (long day) | max. correl. (short day) | max. correl. (long day) | amplitude (short day) | amplitude (long day) | rel. amplitude (short day) | rel. amplitude (long day) | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | 1434843_at | 1.70339e-07 | 0.000380413 | Fam179b | family with sequence similarity 179, member B | 16.1861 | 0.805572 | 0.9855 | 819.271 | 753.437 | 0.314536 | 0.215145 | 0.0078557 | |
2 | 1451342_at | 4.74105e-10 | 2.13826e-05 | Spon1 | spondin 1, (f-spondin) extracellular matrix protein | CA EM | 7.85535 | 0.954424 | 0.981275 | 2395.83 | 1723.7 | 0.538424 | 0.37279 | 1.66293e-05 |
3 | 1447676_x_at | 5.31099e-08 | 0.000245668 | S100a16 | S100 calcium binding protein A16 | 6.4115 | 0.888963 | 0.973571 | 1816.23 | 991.25 | 0.494032 | 0.314649 | 0.000768276 | |
4 | 1430316_at | 2.40968e-05 | 0.00612001 | Ispd | isoprenoid synthase domain containing | 10.5368 | 0.441268 | 0.968442 | 97.7553 | 78.6497 | 0.284342 | 0.221152 | 0.380177 | |
5 | 1456558_s_at | 1.57931e-05 | 0.00499768 | C87977 | expressed sequence C87977 | 7.84718 | 0.610404 | 0.962328 | 2.88082 | 3.15251 | 0.177829 | 0.20331 | 0.120751 | |
6 | 1455258_at | 9.51416e-06 | 0.00369912 | Kcnc2 | potassium voltage gated channel, Shaw-related subfamily, member 2 | Ch | 18.7558 | 0.664276 | 0.961987 | 365.742 | 314.221 | 0.211125 | 0.186625 | 0.0701603 |
7 | 1438201_at | 8.91612e-06 | 0.00357958 | Pdp1 | pyruvate dehyrogenase phosphatase catalytic subunit 1 | 20.2096 | 0.697035 | 0.958205 | 194.317 | 159.01 | 0.373259 | 0.258377 | 0.047602 | |
8 | 1450779_at | 5.02851e-08 | 0.000245668 | Fabp7 | fatty acid binding protein 7, brain | Ng | 7.3529 | 0.922582 | 0.956773 | 815.454 | 962.863 | 0.694502 | 0.894705 | 0.000167402 |
9 | 1438075_at | 6.45939e-06 | 0.00288441 | Fem1c | fem-1 homolog c (C.elegans) | 7.48382 | 0.739135 | 0.956153 | 110.844 | 102.534 | 0.324229 | 0.283029 | 0.0265016 | |
10 | 1419522_at | 5.48434e-06 | 0.00272014 | Zmynd19 | zinc finger, MYND domain containing 19 | 22.0634 | 0.754366 | 0.95498 | 45.4053 | 49.1204 | 0.238351 | 0.287983 | 0.02077 | |
11 | 1428652_at | 0.000156526 | 0.0162287 | 0610010F05Rik | RIKEN cDNA 0610010F05 gene | 14.0578 | 0.26853 | 0.95339 | 225.866 | 274.204 | 0.180434 | 0.205285 | 0.719216 | |
12 | 1458273_at | 2.84975e-05 | 0.00655747 | Hnrnpd | heterogeneous nuclear ribonucleoprotein D | TF | 11.9949 | 0.644455 | 0.949696 | 62.4403 | 55.4643 | 0.286936 | 0.234287 | 0.0867342 |
13 | 1429440_at | 1.41572e-06 | 0.00148489 | 1810041L15Rik | RIKEN cDNA 1810041L15 gene | 3.19643 | 0.838987 | 0.949637 | 224.222 | 124.116 | 0.268711 | 0.168278 | 0.00351101 | |
14 | 1416121_at | 2.13434e-07 | 0.000418525 | Lox | lysyl oxidase | EM | 5.19652 | 0.899957 | 0.949313 | 114.355 | 76.4427 | 0.660732 | 0.429253 | 0.000474491 |
15 | 1434570_at | 1.15234e-06 | 0.00129929 | Bend3 | BEN domain containing 3 | 5.95562 | 0.860223 | 0.947381 | 267.703 | 222.669 | 0.452742 | 0.351142 | 0.00197557 | |
16 | 1425560_a_at | 5.44707e-08 | 0.000245668 | S100a16 | S100 calcium binding protein A16 | 5.86226 | 0.936735 | 0.946323 | 855.01 | 546.144 | 0.399967 | 0.308214 | 6.7626e-05 | |
17 | 1435658_at | 2.00712e-07 | 0.000411468 | Slc27a1 | solute carrier family 27 (fatty acid transporter), member 1 | SLC | 6.95036 | 0.914881 | 0.945521 | 296.181 | 186.165 | 0.267997 | 0.198302 | 0.000259418 |
18 | 1455419_at | 4.06596e-06 | 0.00247809 | D630045J12Rik | RIKEN cDNA D630045J12 gene | 6.81804 | 0.81688 | 0.944776 | 73.514 | 71.8633 | 0.256489 | 0.260713 | 0.0061196 | |
19 | 1416721_s_at | 4.92564e-07 | 0.000673185 | Srsf6 | serine/arginine-rich splicing factor 6 | 7.23267 | 0.897096 | 0.941994 | 943.835 | 819.685 | 0.317486 | 0.258366 | 0.00054766 | |
20 | 1420481_at | 2.61932e-08 | 0.00019689 | Cnnm3 | cyclin M3 | 4.11399 | 0.94913 | 0.941579 | 185.16 | 135.86 | 0.461107 | 0.394211 | 2.43897e-05 | |
21 | 1417430_at | 1.50069e-05 | 0.00499768 | Cdr2 | cerebellar degeneration-related 2 | 21.6258 | 0.760802 | 0.940912 | 167.28 | 211.854 | 0.401399 | 0.443854 | 0.0186637 | |
22 | 1429169_at | 1.12042e-06 | 0.00129569 | Rbm3 | RNA binding motif protein 3 | 19.0031 | 0.876189 | 0.940789 | 154.642 | 136.011 | 0.994051 | 0.912254 | 0.00117403 | |
23 | 1416101_a_at | 1.49392e-07 | 0.000380413 | Hist1h1c | histone cluster 1, H1c | 6.20977 | 0.926219 | 0.940348 | 2412.84 | 2540.74 | 0.406403 | 0.335658 | 0.000134143 | |
24 | 1451303_at | 4.68266e-07 | 0.000673185 | BC002230 | cDNA sequence BC002230 | 6.28146 | 0.901607 | 0.940327 | 253.279 | 120.427 | 0.40437 | 0.227287 | 0.000447884 | |
25 | 1435141_at | 1.77128e-07 | 0.000380413 | Sft2d2 | SFT2 domain containing 2 | 19.4959 | 0.923138 | 0.940026 | 1177.05 | 948.415 | 0.340089 | 0.279997 | 0.000157424 |
TF=Transcription Factor;
Ch=Channel;
GPCR=GPCR;
CA=Cell Adhesion;
EM=Extracellular Matrix;
SP=Structural Protein;
Ng=Neurogenesis;
Hox=Homeobox;
NR=Nuclear Receptor;
NH/NT=NH/NT;
AG=Axon Guidance;
SLC=SLC Transporter;
Fox=Forkhead