Photoperiodism

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Photoperiodism: 24-h rhythmic genes

24-h rhythmic genes both in short-day and long-day conditions (Help)

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Probe set ID P-value FDR Symbol Name Gene Category phase (short day) phase (long day) max. correl. (short day) max. correl. (long day) amplitude (short day) [desc] amplitude (long day) rel. amplitude (short day) rel. amplitude (long day)
1 1447676_x_at [new page][B* page] 5.31099e-08 0.000245668 S100a16 S100 calcium binding protein A16 6.4115 0.888963 0.973571 1816.23 991.25 0.494032 0.314649 0.000768276
2 1435283_s_at [new page][B* page] 1.91767e-05 0.00554415 Fam189a2 family with sequence similarity 189, member A2 9.13165 0.936272 0.760111 450.011 99.6285 0.506094 0.230011 6.98432e-05
3 1418698_a_at [new page][B* page] 0.000177214 0.0175276 Fech ferrochelatase 10.0708 0.950042 0.316469 149.063 99.5643 0.20839 0.151915 2.32811e-05
4 1434710_at [new page][B* page] 0.00109912 0.047279 Dhx29 DEAH (Asp-Glu-Ala-His) box polypeptide 29 23.8363 0.74286 0.830779 74.2247 99.5247 0.17963 0.231486 0.0249895
5 1460725_at [new page][B* page] 0.0010401 0.0458834 Xpa xeroderma pigmentosum, complementation group A 9.55659 0.657261 0.872159 90.9456 99.4693 0.40618 0.408878 0.0758409
6 1444644_x_at [new page][B* page] 0.000670051 0.037296 Tatdn1 TatD DNase domain containing 1 10.7097 0.709098 0.86819 68.4773 99.3227 0.16024 0.253534 0.0407574
7 1432863_a_at [new page][B* page] 0.00083411 0.041138 Nkx2-4 NK2 transcription factor related, locus 4 (Drosophila) TF Hox 5.87253 0.848543 0.732993 245.95 98.9119 0.442707 0.265488 0.00275271
8 1444236_at [new page][B* page] 0.000159516 0.0163585 AW552393 expressed sequence AW552393 8.42982 0.88714 0.770117 99.3842 98.8398 0.347278 0.343421 0.000820381
9 1436394_at [new page][B* page] 0.000255843 0.0221899 Trim37 tripartite motif-containing 37 8.52353 0.818726 0.836512 120.453 98.5141 0.217854 0.182502 0.00583801
10 1426277_at [new page][B* page] 2.16386e-05 0.00595074 Tmem203 transmembrane protein 203 7.15671 0.747211 0.937939 173.544 98.0097 0.411065 0.289758 0.0233554
11 1435130_at [new page][B* page] 0.000544608 0.0334845 Fam18a family with sequence similarity 18, member A 8.61323 0.696092 0.880337 244.064 97.8118 0.423294 0.222419 0.0481298
12 1426453_at [new page][B* page] 0.000425876 0.0297329 Pitrm1 pitrilysin metallepetidase 1 5.68282 0.926049 0.494619 143.244 97.6184 0.181296 0.129317 0.000134143
13 1450779_at [new page][B* page] 5.02851e-08 0.000245668 Fabp7 fatty acid binding protein 7, brain Ng 7.3529 0.922582 0.956773 815.454 962.863 0.694502 0.894705 0.000167402
14 1439107_a_at [new page][B* page] 0.000136547 0.0152815 Mll5 myeloid/lymphoid or mixed-lineage leukemia 5 TF 12.7512 0.951558 0.36906 188.129 96.693 0.393969 0.205537 2.10638e-05
15 1416627_at [new page][B* page] 0.000696722 0.0376322 Spint1 serine protease inhibitor, Kunitz type 1 8.60311 0.668417 0.882253 129.448 96.47 0.502817 0.297202 0.0669353
16 1419518_at [new page][B* page] 0.000640189 0.036456 Tuba8 tubulin, alpha 8 SP 6.14813 0.349777 0.930776 31.6984 96.4354 0.207902 0.642428 0.560786
17 1448948_at [new page][B* page] 0.00110457 0.047279 Rag1ap1 recombination activating gene 1 activating protein 1 8.55636 0.870649 0.655939 227.71 95.9987 0.302152 0.148621 0.00141793
18 1457296_at [new page][B* page] 3.68881e-05 0.00756222 Cilp cartilage intermediate layer protein, nucleotide pyrophosphohydrolase EM 8.54469 0.86979 0.862715 106.988 95.9117 0.867233 0.737928 0.00146116
19 1436888_at [new page][B* page] 0.00053687 0.0334076 Nhlh2 nescient helix loop helix 2 TF 10.7462 0.446918 0.92648 94.6035 95.7061 0.437358 0.362513 0.369544
20 1438453_at [new page][B* page] 4.69733e-05 0.00857298 Rad51c RAD51 homolog c (S. cerevisiae) 21.8091 0.871695 0.85175 123.69 95.4378 0.578774 0.407055 0.00137026
21 1434151_at [new page][B* page] 2.28245e-06 0.00188365 Mettl7a1 methyltransferase like 7A1 16.8935 0.946317 0.839149 676.189 948.901 0.397437 0.527829 3.88018e-05
22 1435141_at [new page][B* page] 1.77128e-07 0.000380413 Sft2d2 SFT2 domain containing 2 19.4959 0.923138 0.940026 1177.05 948.415 0.340089 0.279997 0.000157424
23 1437857_at [new page][B* page] 0.000493194 0.032237 Dpy19l3 dpy-19-like 3 (C. elegans) 6.57792 0.858964 0.750984 110.044 94.8037 0.308056 0.24899 0.00203765
24 1431510_s_at [new page][B* page] 2.51854e-05 0.00620703 Cmc1 COX assembly mitochondrial protein homolog (S. cerevisiae) 10.8344 0.901439 0.834854 110.647 94.5533 0.479367 0.472531 0.000450101
25 1450735_at [new page][B* page] 0.00117277 0.048715 Pno1 partner of NOB1 homolog (S. cerevisiae) 6.0822 0.916268 0.391955 112.805 94.3651 0.237392 0.19396 0.000245006
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TF=Transcription Factor; Ch=Channel; GPCR=GPCR; CA=Cell Adhesion; EM=Extracellular Matrix; SP=Structural Protein; Ng=Neurogenesis; Hox=Homeobox; NR=Nuclear Receptor; NH/NT=NH/NT; AG=Axon Guidance; SLC=SLC Transporter; Fox=Forkhead
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