Photoperiodism

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Photoperiodism: 24-h rhythmic genes

24-h rhythmic genes both in short-day and long-day conditions (Help)

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Probe set ID P-value FDR Symbol Name Gene Category phase (short day) phase (long day) max. correl. (short day) max. correl. (long day) amplitude (short day) amplitude (long day) rel. amplitude (short day) rel. amplitude (long day) [desc]
1 1428652_at [new page][B* page] 0.000156526 0.0162287 0610010F05Rik RIKEN cDNA 0610010F05 gene 14.0578 0.26853 0.95339 225.866 274.204 0.180434 0.205285 0.719216
2 1419518_at [new page][B* page] 0.000640189 0.036456 Tuba8 tubulin, alpha 8 SP 6.14813 0.349777 0.930776 31.6984 96.4354 0.207902 0.642428 0.560786
3 1435236_at [new page][B* page] 0.000470129 0.0312005 Tceanc transcription elongation factor A (SII) N-terminal and central domain containing TF 9.86147 0.356443 0.935055 67.6937 74.4731 0.347075 0.328955 0.547429
4 1442294_at [new page][B* page] 0.00107502 0.0466197 A530053G22Rik RIKEN cDNA A530053G22 gene 17.5911 0.367739 0.919792 1.94003 3.45489 0.133605 0.249408 0.524757
5 1430316_at [new page][B* page] 2.40968e-05 0.00612001 Ispd isoprenoid synthase domain containing 10.5368 0.441268 0.968442 97.7553 78.6497 0.284342 0.221152 0.380177
6 1436888_at [new page][B* page] 0.00053687 0.0334076 Nhlh2 nescient helix loop helix 2 TF 10.7462 0.446918 0.92648 94.6035 95.7061 0.437358 0.362513 0.369544
7 1437351_at [new page][B* page] 0.000783122 0.0396849 Cxxc4 CXXC finger 4 8.30293 0.461232 0.918436 252.678 251.136 0.15571 0.152186 0.343112
8 1455665_at [new page][B* page] 0.00106205 0.0464331 Lonrf1 LON peptidase N-terminal domain and ring finger 1 17.4938 0.479741 0.909017 652.759 369.89 0.78977 0.420359 0.309962
9 1437459_x_at [new page][B* page] 0.00104874 0.0461906 Slc25a19 solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19 SLC 12.0818 0.508031 0.904745 2.6028 1.86632 0.167516 0.12781 0.261746
10 1436003_at [new page][B* page] 0.00121801 0.0497136 Vcam1 vascular cell adhesion molecule 1 CA 15.3216 0.512027 0.899873 2.97261 2.65017 0.177035 0.152471 0.255133
11 1423130_a_at [new page][B* page] 0.000547569 0.0335542 Srsf5 serine/arginine-rich splicing factor 5 TF 7.1194 0.52012 0.919319 2195.73 2531.78 0.355235 0.278349 0.242348
12 1424408_at [new page][B* page] 0.000764026 0.0394671 Lims2 LIM and senescent cell antigen like domains 2 2.06176 0.538544 0.908804 242.208 165.659 0.27995 0.232499 0.213857
13 1415839_a_at [new page][B* page] 0.000776035 0.0395995 Npm1 nucleophosmin 1 TF 14.7421 0.546828 0.906928 1092.83 687.59 0.201385 0.128106 0.201751
14 1428303_at [new page][B* page] 0.000681545 0.037296 Btbd17 BTB (POZ) domain containing 17 5.01129 0.553439 0.909367 42.019 33.0228 0.326571 0.255294 0.192282
15 1431058_at [new page][B* page] 0.000851144 0.0415449 Htatsf1 HIV TAT specific factor 1 TF 12.331 0.556115 0.902438 13.8087 11.8202 0.238359 0.211341 0.188588
16 1443221_at [new page][B* page] 0.000701174 0.037737 22.2028 0.556278 0.908099 4.42784 3.31662 0.275062 0.219005 0.188357
17 1429627_at [new page][B* page] 0.000374262 0.0276262 Ppil3 peptidylprolyl isomerase (cyclophilin)-like 3 9.66661 0.558565 0.921675 218.549 131.551 0.176189 0.10311 0.185285
18 1438995_at [new page][B* page] 0.00117305 0.048715 23.9642 0.569124 0.892065 14.0617 16.9457 0.253907 0.315158 0.171087
19 1434261_at [new page][B* page] 0.00047219 0.031272 Sipa1l2 signal-induced proliferation-associated 1 like 2 19.4743 0.588911 0.912439 223.138 138.071 0.357212 0.199338 0.145852
20 1451654_x_at [new page][B* page] 0.000667568 0.037296 Zfp825 zinc finger protein 825 TF 12.8274 0.595309 0.901259 38.1334 26.4055 0.353241 0.201368 0.138188
21 1427042_at [new page][B* page] 0.000590959 0.035254 Mal2 mal, T-cell differentiation protein 2 10.4319 0.595707 0.90466 110.033 79.26 0.218991 0.189674 0.137682
22 1433794_at [new page][B* page] 0.00117858 0.0487216 Setx senataxin 13.4685 0.596557 0.886184 593.808 642.53 0.209407 0.212215 0.136653
23 1453804_a_at [new page][B* page] 0.000113331 0.0135894 Orc4l origin recognition complex, subunit 4-like (S. cerevisiae) 18.8797 0.599854 0.936693 102.407 124.606 0.224446 0.277244 0.132788
24 1456415_at [new page][B* page] 0.00116284 0.0485603 Zfp451 zinc finger protein 451 TF 19.8236 0.600863 0.885503 211.182 186.597 0.341695 0.283816 0.131568
25 1434787_at [new page][B* page] 0.000576338 0.0347506 Arf3 ADP-ribosylation factor 3 21.5578 0.607818 0.903081 69.946 59.5371 0.209172 0.171268 0.123578
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TF=Transcription Factor; Ch=Channel; GPCR=GPCR; CA=Cell Adhesion; EM=Extracellular Matrix; SP=Structural Protein; Ng=Neurogenesis; Hox=Homeobox; NR=Nuclear Receptor; NH/NT=NH/NT; AG=Axon Guidance; SLC=SLC Transporter; Fox=Forkhead
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