Photoperiodism

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Photoperiodism: 24-h rhythmic genes

24-h rhythmic genes both in short-day and long-day conditions (Help)

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Probe set ID [asc] P-value FDR Symbol Name Gene Category phase (short day) phase (long day) max. correl. (short day) max. correl. (long day) amplitude (short day) amplitude (long day) rel. amplitude (short day) rel. amplitude (long day)
151 1419703_at [new page][B* page] 0.000776168 0.0395995 Col5a3 collagen, type V, alpha 3 CA EM SP 7.09164 0.837258 0.756466 49.5896 52.2986 0.290543 0.338931 0.00367841
152 1419754_at [new page][B* page] 0.000439693 0.0303432 Myo5a myosin VA 10.9534 0.726568 0.874698 325.679 328.873 0.327908 0.333014 0.0319306
153 1419765_at [new page][B* page] 1.47899e-06 0.00151599 Cul2 cullin 2 8.2737 0.928632 0.889369 150.224 101.034 0.620782 0.440996 0.00011308
154 1420058_s_at [new page][B* page] 0.000665396 0.037296 Fam54b family with sequence similarity 54, member B 7.11652 0.900021 0.601113 253.195 100.435 0.282349 0.129178 0.000474491
155 1420093_s_at [new page][B* page] 4.94316e-06 0.00259314 Hnrpdl heterogeneous nuclear ribonucleoprotein D-like TF 9.04037 0.887123 0.906047 1200 1548.22 0.480073 0.505992 0.000822598
156 1420123_at [new page][B* page] 2.75298e-06 0.00214072 Tcta T-cell leukemia translocation altered gene 7.03955 0.897419 0.910997 1161.27 568.997 0.496876 0.268565 0.000537682
157 1420124_s_at [new page][B* page] 4.42195e-05 0.00837959 Tcta T-cell leukemia translocation altered gene 7.5167 0.866945 0.859614 978.48 311.254 0.605531 0.22852 0.00161748
158 1420373_at [new page][B* page] 0.000158514 0.0163223 Foxj2 forkhead box J2 TF Fox 18.9915 0.957455 0.156107 11.1829 9.74885 0.218117 0.209814 1.44121e-05
159 1420376_a_at [new page][B* page] 2.81176e-05 0.00650324 H3f3b H3 histone, family 3B 7.60481 0.892618 0.84551 2397 1594.23 0.341454 0.20794 0.000665174
160 1420377_at [new page][B* page] 1.59568e-05 0.00499768 St8sia2 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 7.65753 0.765807 0.938676 221.512 455.279 0.50459 0.464362 0.017136
161 1420394_s_at [new page][B* page] 0.000931195 0.0437477 Gp49a glycoprotein 49 A 6.38447 0.90502 0.526287 10.7836 11.0885 0.269775 0.287269 0.000388018
162 1420427_a_at [new page][B* page] 2.47413e-05 0.00616496 Dhx32 DEAH (Asp-Glu-Ala-His) box polypeptide 32 7.22491 0.777088 0.927602 236.367 53.4515 0.384788 0.122631 0.0139686
163 1420462_at [new page][B* page] 0.00066769 0.037296 Il1rapl2 interleukin 1 receptor accessory protein-like 2 10.8886 0.87609 0.688328 94.7576 86.7081 0.600878 0.529215 0.00117847
164 1420481_at [new page][B* page] 2.61932e-08 0.00019689 Cnnm3 cyclin M3 4.11399 0.94913 0.941579 185.16 135.86 0.461107 0.394211 2.43897e-05
165 1420609_at [new page][B* page] 3.30121e-06 0.00222221 March7 membrane-associated ring finger (C3HC4) 7 10.6707 0.930536 0.861703 442.975 445.159 0.269312 0.25332 0.000106428
166 1420772_a_at [new page][B* page] 0.000100189 0.0125645 Tsc22d3 TSC22 domain family, member 3 TF 19.2489 0.842831 0.852606 930.569 1231.81 0.512037 0.600429 0.00319173
167 1421012_at [new page][B* page] 0.000498303 0.0323366 Srprb signal recognition particle receptor, B subunit 22.149 0.910993 0.588042 131.621 136.028 0.368366 0.345132 0.000308197
168 1421018_at [new page][B* page] 0.00106839 0.0465113 1110018J18Rik RIKEN cDNA 1110018J18 gene 20.3243 0.756123 0.82332 14.3213 17.3633 0.276014 0.31913 0.0201858
169 1421037_at [new page][B* page] 2.89781e-05 0.00660072 Npas2 neuronal PAS domain protein 2 TF 3.90781 0.848382 0.889713 79.9658 52.8328 1.26381 0.90411 0.0027638
170 1421071_at [new page][B* page] 0.000905581 0.043174 Vhl von Hippel-Lindau tumor suppressor TF 22.0301 0.88189 0.642396 32.5462 32.0469 0.373101 0.306033 0.000987783
171 1421087_at [new page][B* page] 1.7961e-06 0.00168763 Per3 period homolog 3 (Drosophila) TF 15.9716 0.917927 0.90012 788.503 1032.49 0.604854 0.700807 0.000222833
172 1421115_a_at [new page][B* page] 0.000988334 0.0451771 Zdhhc16 zinc finger, DHHC domain containing 16 7.90145 0.833001 0.746895 135.33 80.9957 0.322122 0.210435 0.00410966
173 1421375_a_at [new page][B* page] 5.05968e-06 0.00259314 S100a6 S100 calcium binding protein A6 (calcyclin) 10.8234 0.940062 0.821299 299.962 156.313 0.509565 0.377752 5.76484e-05
174 1421564_at [new page][B* page] 0.000447378 0.0306179 Serpina3c serine (or cysteine) peptidase inhibitor, clade A, member 3C 17.9905 0.786848 0.839469 17.8464 12.6272 0.469063 0.374267 0.0115785
175 1421594_a_at [new page][B* page] 0.000155635 0.0161735 Sytl2 synaptotagmin-like 2 9.2824 0.937163 0.554617 33.9447 39.6626 0.329273 0.3091 6.65174e-05
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TF=Transcription Factor; Ch=Channel; GPCR=GPCR; CA=Cell Adhesion; EM=Extracellular Matrix; SP=Structural Protein; Ng=Neurogenesis; Hox=Homeobox; NR=Nuclear Receptor; NH/NT=NH/NT; AG=Axon Guidance; SLC=SLC Transporter; Fox=Forkhead
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