Photoperiodism

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Photoperiodism: 24-h rhythmic genes

24-h rhythmic genes both in short-day and long-day conditions (Help)

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Probe set ID P-value FDR Symbol Name Gene Category phase (short day) phase (long day) max. correl. (short day) max. correl. (long day) amplitude (short day) amplitude (long day) [asc] rel. amplitude (short day) rel. amplitude (long day)
76 1418895_at [new page][B* page] 0.00113299 0.047756 Skap2 src family associated phosphoprotein 2 4.09289 0.795541 0.787101 182.661 204.401 0.200613 0.19865 0.00974369
77 1428982_at [new page][B* page] 0.00102757 0.0458834 Atad2b ATPase family, AAA domain containing 2B 18.4799 0.775252 0.810785 247.497 297.626 0.200667 0.231433 0.0144309
78 1456769_at [new page][B* page] 0.000187595 0.0181154 Dusp3 dual specificity phosphatase 3 (vaccinia virus phosphatase VH1-related) 9.79874 0.904491 0.713254 27.6163 23.7926 0.200673 0.193284 0.000403539
79 1455298_at [new page][B* page] 4.81325e-05 0.00857298 8.13085 0.844907 0.87632 200.851 170.901 0.200878 0.236161 0.00303763
80 1415839_a_at [new page][B* page] 0.000776035 0.0395995 Npm1 nucleophosmin 1 TF 14.7421 0.546828 0.906928 1092.83 687.59 0.201385 0.128106 0.201751
81 1427622_at [new page][B* page] 0.000914449 0.043459 Tmed8 transmembrane emp24 domain containing 8 23.4203 0.913729 0.473641 13.8 10.275 0.201962 0.15907 0.000276047
82 1432868_at [new page][B* page] 0.00114619 0.048043 Dzip3 DAZ interacting protein 3, zinc finger 8.90207 0.926415 0.192515 40.8365 40.102 0.202037 0.195008 0.000134143
83 1421840_at [new page][B* page] 0.00067678 0.037296 Abca1 ATP-binding cassette, sub-family A (ABC1), member 1 9.39874 0.907125 0.566943 636.738 401.964 0.202677 0.119987 0.000364737
84 1415680_at [new page][B* page] 0.000369068 0.0274243 Anapc1 anaphase promoting complex subunit 1 6.31666 0.897815 0.675815 77.025 66.7082 0.202858 0.18177 0.000528813
85 1455248_at [new page][B* page] 0.00079654 0.0401394 Ccdc127 coiled-coil domain containing 127 8.95988 0.808631 0.792148 82.1515 69.5395 0.204715 0.157976 0.00732024
86 1427063_at [new page][B* page] 0.000504585 0.0325104 5330417C22Rik RIKEN cDNA 5330417C22 gene 7.86059 0.925117 0.471952 159.785 118.483 0.204924 0.200681 0.000141904
87 1448454_at [new page][B* page] 0.000673077 0.037296 Srsf6 serine/arginine-rich splicing factor 6 21.8664 0.806367 0.803845 391.25 728.7 0.205566 0.338047 0.00770715
88 1415796_at [new page][B* page] 0.000969403 0.0446487 Dazap2 DAZ associated protein 2 6.90268 0.830349 0.752374 840.263 716.049 0.206402 0.17119 0.00439791
89 1415747_s_at [new page][B* page] 0.000519774 0.0330461 Riok3 RIO kinase 3 (yeast) 10.4383 0.759742 0.852173 563.378 402.531 0.206593 0.132264 0.018994
90 1423441_at [new page][B* page] 4.25596e-05 0.00826035 Tfb2m transcription factor B2, mitochondrial TF 8.96852 0.96699 0.277936 162.017 145.857 0.206672 0.170312 4.43449e-06
91 1417042_at [new page][B* page] 0.000585848 0.0351169 Slc37a4 solute carrier family 37 (glucose-6-phosphate transporter), member 4 SLC 11.479 0.736783 0.860249 136.544 88.4877 0.206672 0.147342 0.0274273
92 1441524_at [new page][B* page] 0.000520365 0.0330461 14.4684 0.938419 0.257867 7.67601 8.54997 0.2075 0.237087 6.43001e-05
93 1419518_at [new page][B* page] 0.000640189 0.036456 Tuba8 tubulin, alpha 8 SP 6.14813 0.349777 0.930776 31.6984 96.4354 0.207902 0.642428 0.560786
94 1418698_a_at [new page][B* page] 0.000177214 0.0175276 Fech ferrochelatase 10.0708 0.950042 0.316469 149.063 99.5643 0.20839 0.151915 2.32811e-05
95 1452743_at [new page][B* page] 0.000264682 0.0226088 Pole3 polymerase (DNA directed), epsilon 3 (p17 subunit) 5.54339 0.825976 0.828467 203.239 190.253 0.208918 0.181572 0.00490566
96 1434787_at [new page][B* page] 0.000576338 0.0347506 Arf3 ADP-ribosylation factor 3 21.5578 0.607818 0.903081 69.946 59.5371 0.209172 0.171268 0.123578
97 1433794_at [new page][B* page] 0.00117858 0.0487216 Setx senataxin 13.4685 0.596557 0.886184 593.808 642.53 0.209407 0.212215 0.136653
98 1429249_at [new page][B* page] 4.72057e-05 0.00857298 4833424O15Rik RIKEN cDNA 4833424O15 gene 22.9026 0.918682 0.769044 12.1497 14.4005 0.209636 0.253849 0.000215073
99 1416611_at [new page][B* page] 0.000115739 0.0137179 Scamp2 secretory carrier membrane protein 2 7.67089 0.934378 0.626581 206.608 113.209 0.210227 0.173436 8.86898e-05
100 1455441_at [new page][B* page] 5.03572e-06 0.00259314 Map3k7 mitogen-activated protein kinase kinase kinase 7 6.90402 0.92586 0.854474 58.9236 84.7198 0.21103 0.324233 0.000135252
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TF=Transcription Factor; Ch=Channel; GPCR=GPCR; CA=Cell Adhesion; EM=Extracellular Matrix; SP=Structural Protein; Ng=Neurogenesis; Hox=Homeobox; NR=Nuclear Receptor; NH/NT=NH/NT; AG=Axon Guidance; SLC=SLC Transporter; Fox=Forkhead
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